Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0660 ATGGGGAGAAGAAACGGGGGAAGGCCACTGCTCGGAACTCTCCGTCGTCGATTGGATTCGTGCAAGTCCCGCTACACCACCGTCGATGACATCGTTAACCACCTCCGCTCCACTTACCCCGATTACCAGCGCACCAAGCAGCAAGCCCTCACTCGATTAGTTCAACAAGTCCTCGAGCCACGTGCCAAACACGCGCCGCCCAAAGTCTCTCCCACGCGCGACGACGAAGACGATGACGAAGAAAGAGGTCGAAGCGCGCCCCGAAGGAGACGGAATACAATCGACCAAGGCGAAGAAAGGTTGCAGAAGATGGAGGCTTTGCACCTGCGTAAAAGGATGCAGGGAGAAGAGGAAGCTCAGGGTTCTGCTTCTACGTCCTCTGCTTCAAGCTCGAGCGCGTCCGGGAGCAGCGGCAGTGAGGAGGAGGAGGATGATGATGATGGCGCAGTATCTATGTCGACATCGGAGGACGCAATTTACGGGGAGAAGTACGAACCTGCTTTCGATTTGATGAAGACGATGCTGCGGAATAAGTACACTCCCAAAAAGGATGATAATGTGAGGAAGAAGAAGCCAGTTGTGGAGGATAAGAACGTTGAATTGGAGGTGGCCAATAGTAGCAAGGTTACTAACGAGCTTTGTGCTGTGAACGGAGGCAGAGGCGAAGCGAAAGCTGCTGCGAAGGATGTGAATTCAAAGGGTTCCGTTTCGAATGGCACCGGTGGTGGTGGCAGCGATGTTGAATTGAAACAGAAGACGGGACCGAGGTTCAGTGATTTGGGTGGAATGCAGGATGTTTTGGAGGAGCTGATGGAAGTGATTGTGCCATTGTATCATCCCGAGTTGCCAAGAGAGCTGGGTGTTACTCCTACTACTGGAATCTTGCTGCATGGGCCACCTGGTTGTGGCAAGACCACACTGGCTCACGCCATAGCTAATGAGACCGGTCTTCCCTTCTATCAGATATCAGCTACTGAATTGGTTTCAGGAGTCTCAGGTGCATCTGAAGAGAATATTAGAGAGCTTTTCACTAAAGCATATAGGACTGCCCCATCAATCGTCTTCATTGATGAGATTGATTCAATTGCTTCGAAAAGAGAGAATTTACAACGAGAGATGGAGAAGAGAATTGTAACACAGTTACTGGTTAGCATGGATCAATCAAGTAGGCGTATGGAATCTGCTAATGATTCGGACAGTTCTAAAGTTCATCCTGGCCATGTTCTTATAATTGGAGCAACAAATAGGCCTGATACTCTTGACCCGGCCTTGAGAAGGCCTGGGAGGTTTGATCGTGAGATTGTTGTTGGCATTCCTGATGAATCTTCAAGAGAGCATATCCTTACTATGCTTACACGCAATCTTAAACTTGAGGGTTCATTGGATCTTAAACATATAGCAAGATCTACGCCAGGATACGTCAGTGCTGATTTGGTAGCTGTGGTTAAGGAGGCTGGTAATTTGGCAATAAAGAGAATCATTTCTGGAAGGAAATGGGAACTATCTCAGGATCATACAAGGTGTCTTGGAGACTGGTGGAAGGAACCTTGGTCGCATGAAGATGTGGATAAGCTTGTTTGCACAATGTCTGATTTTCAGGAAGCAGTGAAAAAGGTACAACCTTCATTAAGAAGAGAGGGCTTCTCATCCGTTCCCAATGTGAAATGGGAAGATGTTGGGGGCCTTGATTGTTTAAGGGAGGAGTTTGAATCCAGTATAATAAGGCCAATAAAATATCCCGAGGTTTATCAGACATTTGAGGTGGTAAATGAGACGGGAATTTTGCTTTTTGGGCCCCCTGGTTGCGGTAAAACTCTTATTGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTCATTCATATTAAGGGGCCTGAACTCTTAAATAAATTTGTTGGAGAAAGTGAGCGAGAAGTTCGACGAGTGTTTAGTCGTGCAAGGGCATGTTCACCCTGTATAGTATTTTTTGACGAGGTGGATGCTCTATCAACCAAACGGGATTCGGAAGGTGGATCGGTAGTCGAACGAGTAGTGAACCAGTTACTTATTGAGCTAAATGGTGGCGACCAGCGCCAAGGTGTTTTTGTTATTGGTGCTACAAATAGGCCCGATGTGATGGATGAGGCTCTCCTCCGTTCTGGTAGACTTGGTAAATTTCTTTACGTTCCTGTGCCGAACGCTGACCAGCGATTTTCAATATTGAAAGCTCTTGCAAGGAAGAAGCCTGCTGATTCTACTGTGGATTTGAGAGCCATAGCTGAAGCTTGTGAAAATTTTAGTGGCGCAGACCTTGCTGCATTGATGAATGAAGCAGCTAAAGCTGCTGTCAATGAGAAATTGACCTCAGTTGAAGCTACTAGTGATACTAATACATACATGCCAAGGCATTTCGAGATAGCACTTACTAAAGTCTCTCCCTCTGTGTCTCCCGCGGAAAGGCGTAGGTACGAGCGTTTGGCAGAGCGCTTTAAAGCATCATGA 2481 0.472 MGRRNGGRPLLGTLRRRLDSCKSRYTTVDDIVNHLRSTYPDYQRTKQQALTRLVQQVLEPRAKHAPPKVSPTRDDEDDDEERGRSAPRRRRNTIDQGEERLQKMEALHLRKRMQGEEEAQGSASTSSASSSSASGSSGSEEEEDDDDGAVSMSTSEDAIYGEKYEPAFDLMKTMLRNKYTPKKDDNVRKKKPVVEDKNVELEVANSSKVTNELCAVNGGRGEAKAAAKDVNSKGSVSNGTGGGGSDVELKQKTGPRFSDLGGMQDVLEELMEVIVPLYHPELPRELGVTPTTGILLHGPPGCGKTTLAHAIANETGLPFYQISATELVSGVSGASEENIRELFTKAYRTAPSIVFIDEIDSIASKRENLQREMEKRIVTQLLVSMDQSSRRMESANDSDSSKVHPGHVLIIGATNRPDTLDPALRRPGRFDREIVVGIPDESSREHILTMLTRNLKLEGSLDLKHIARSTPGYVSADLVAVVKEAGNLAIKRIISGRKWELSQDHTRCLGDWWKEPWSHEDVDKLVCTMSDFQEAVKKVQPSLRREGFSSVPNVKWEDVGGLDCLREEFESSIIRPIKYPEVYQTFEVVNETGILLFGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKFVGESEREVRRVFSRARACSPCIVFFDEVDALSTKRDSEGGSVVERVVNQLLIELNGGDQRQGVFVIGATNRPDVMDEALLRSGRLGKFLYVPVPNADQRFSILKALARKKPADSTVDLRAIAEACENFSGADLAALMNEAAKAAVNEKLTSVEATSDTNTYMPRHFEIALTKVSPSVSPAERRRYERLAERFKAS* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0660 826 Pfam ATPase family associated with various cellular activities (AAA) 594 723 IPR003959 GO:0005524|GO:0016887
Ahy19g0660 826 Pfam ATPase family associated with various cellular activities (AAA) 294 436 IPR003959 GO:0005524|GO:0016887
Ahy19g0660 826 Pfam AAA+ lid domain 747 785 IPR041569 -
Ahy19g0660 826 Pfam AAA+ lid domain 461 503 IPR041569 -
Ahy19g0660 826 ProSitePatterns AAA-protein family signature. 694 712 IPR003960 GO:0005524|GO:0016887
Ahy19g0660 826 SMART AAA_5 590 726 IPR003593 -
Ahy19g0660 826 SMART AAA_5 290 440 IPR003593 -
Ahy19g0660 826 Gene3D - 439 546 - -
Ahy19g0660 826 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 65 822 - -
Ahy19g0660 826 MobiDBLite consensus disorder prediction 112 158 - -
Ahy19g0660 826 Gene3D - 725 802 - -
Ahy19g0660 826 Gene3D - 552 817 IPR027417 -
Ahy19g0660 826 MobiDBLite consensus disorder prediction 57 99 - -
Ahy19g0660 826 CDD AAA 593 723 - -
Ahy19g0660 826 MobiDBLite consensus disorder prediction 225 255 - -
Ahy19g0660 826 CDD AAA 293 437 - -
Ahy19g0660 826 ProSitePatterns AAA-protein family signature. 408 426 IPR003960 GO:0005524|GO:0016887
Ahy19g0660 826 PANTHER AAA-FAMILY ATPASE 65 822 - -
Ahy19g0660 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 256 538 IPR027417 -
Ahy19g0660 826 MobiDBLite consensus disorder prediction 66 99 - -
Ahy19g0660 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 552 822 IPR027417 -
Ahy19g0660 826 Gene3D - 245 437 IPR027417 -
Ahy19g0660 826 MobiDBLite consensus disorder prediction 118 137 - -
Ahy19g0660 826 Pfam Nucleolin binding domain 19 59 IPR031996 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0660 Ahy-Chr19 9100465 9105052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0660 251 824 Calmodulin-binding Proteins AT3G56690 36.349 6.37e-119 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0660 K14571 - gmx:100809594 966.066