Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0627 ATGCGTATCCTAAAGCATCCCATAGTGCCAACAGGCCTGGTTGGAATTGAAGAAATCCGTAAAATTGTTAAAGTCAACATGAAGCAACACCGAGTAATTGGAATCTGGGGTATGCGTGGGATAGGGAAGACAACCATCGCTAAAATGTTATTTGCAAAATCCTTTCCTCATTATGACCATGTTTGCTATGCGGAAAATGCAAAAGAATATACGCCTCAAAGGCTTCTCTCAGAGCTATTGAGGGAACGAATTACCACTGACGCAACAGGGTTTGTCAACAGTATGAGCAGCCTTAGCAATAAGAAAGTTCTCATTATCCTCGACAATGTGAAGGATTCTGATCAACCATTGTTAGAAGCAGTTTGCCAAGGGTACAAGAGCCACAGTCGAGAAAGTAAACTTATTATAACAACAACACATAAGCATTTGCTTGAAAAGAGAGTTGATTGGACATTTGAGGTCAAACAATGGGACGACTCAAAATCTATAGAGCTTCTTAGCCTGAAAGCATTCGAGGAAAGCATCCCTCCAAAGCCTTATGAGATTCTGGTGAATAAGGTTGTTAAGTATGCCGGGGGAATTCCTTTAGCTCTGAACCTATTGGGTTCATATCTTCAATCCAGAAGCATTGAGTTCTGGGAAAGTACTTTGGAAAAGCTCCAGAAGCATCCTATTAAGCGCATTCAGGCTGCCTTTACGGAGAGTTATGATGAATTGGATGACTTAGACAAGGAGATATTTCTTGACATTGCATTCTTTTTCCATGGAGAAAAGAAAGATCTTGTCACAAGCATATTAAAAGCATGTGAATTCTCACCCATAAGGGGAATAGAGATCCTTCAAGATAAAGCAATGATTACTACTATTCCATATAAGGAAACAATCGAAATGCATGGCTTGCTAAGAGAAATGGCTTACGAGATCGTACACGAGGAAAACAGTAAAGACCCTAGAAAACGTAGCCGATTGAAGGATACTGAAGATATTTGTGTTGTACTCAAAGAGAACAAGAAATCGCTTGATGCAATTGAAGGCATAATATTAGATTTGTCTCAAATTAAAGACTTGCGTTTGAGTCCTGACACATTTAAAAGGATGAATAACTTGAGATTTCTAAAATTATACATCCCCTCGGGTCAGAGTTCTGGTAATATGATCCTTCCTACAGACCTTGAACCATTTTCTGATAAACTAAGGTACTTTGAGTGGCATCAGTACCCTTTCGTTTCTCTTCCACCAAGTTTTTATGCTAAGTTACTTGTTGAGATTCGCATGCCGCACAGCCAAGTCAAGAAACTCTGGGAGGAAAAGCAGGTAAAGATATAA 1326 0.3944 MRILKHPIVPTGLVGIEEIRKIVKVNMKQHRVIGIWGMRGIGKTTIAKMLFAKSFPHYDHVCYAENAKEYTPQRLLSELLRERITTDATGFVNSMSSLSNKKVLIILDNVKDSDQPLLEAVCQGYKSHSRESKLIITTTHKHLLEKRVDWTFEVKQWDDSKSIELLSLKAFEESIPPKPYEILVNKVVKYAGGIPLALNLLGSYLQSRSIEFWESTLEKLQKHPIKRIQAAFTESYDELDDLDKEIFLDIAFFFHGEKKDLVTSILKACEFSPIRGIEILQDKAMITTIPYKETIEMHGLLREMAYEIVHEENSKDPRKRSRLKDTEDICVVLKENKKSLDAIEGIILDLSQIKDLRLSPDTFKRMNNLRFLKLYIPSGQSSGNMILPTDLEPFSDKLRYFEWHQYPFVSLPPSFYAKLLVEIRMPHSQVKKLWEEKQVKI* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0627 441 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 437 IPR044974 GO:0006952
Ahy19g0627 441 Gene3D - 157 240 IPR042197 -
Ahy19g0627 441 Pfam NB-ARC domain 22 240 IPR002182 GO:0043531
Ahy19g0627 441 Gene3D - 7 149 IPR027417 -
Ahy19g0627 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 250 IPR027417 -
Ahy19g0627 441 PRINTS Disease resistance protein signature 97 111 - -
Ahy19g0627 441 PRINTS Disease resistance protein signature 32 47 - -
Ahy19g0627 441 PRINTS Disease resistance protein signature 191 205 - -
Ahy19g0627 441 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 437 - -
Ahy19g0627 441 Pfam Leucine Rich Repeat 420 438 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0627 Ahy-Chr19 8370188 8371621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0627 18 434 WRKY Transcription Factor Family AT5G45050 33.409 3.97e-59 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0627 - - ahf:112777839 880.167