Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0621 ATGGATTTGGTTACCGATGGAGATGTAATAAAGGCTTCGAGGGAAATCCATACGATCTGGAAGGTTGCCGAGATAACACCCATAATTGCATCAGTGAACATCATTGCCGTGAAACTGAAGGGTCGTTCGAGTGCTTTTGTCCTGCTGGGGAATCTGGAGATGGAAAAAGGGAAGGTAAAGGATGCCACCGAACCCTTGTTTAGGCGTTGGACTTCTAATCCTGATTGTAGGAGCTTTTTGCATATACCTGAGGTATCTGAAAAGGAAACTAATCAACTTGAAAGACAAGTTCTTAAAAAAAATGGTGGTCCCATTTTACAACAAAAGCTTTTAAATGCTAAAATCTTCACATTAGAGCAACTTATTAAGGCCACCAACAACTTTGATGAGAGACTAATCATTGGTAAAGGACATATTAGTACGGTTTTCAAAGGAATTTTGTCCAATAATAGGGTTGTTGCTATCAAGAAGTTCAGGGAACTAGATCAGAACGTAATCGAGGAATTCATTGATTGGTTGGTTCTTCTAGAACAAATCAGGCATAGGAATGTGGTCCCCATCTTGGGTTGTTGTTTAGAGAGTGAAGTTCCTTTACTGGTTTATGAATTTTTCAATAATGGTACCGTTTTTGACCACCTACACAAGGAAGAGAAGATCAACTTATCATGGAAAACTCGTCTACAGATAGCAACAGAGGCAGCTAGAGCTCTAGATTATTTGCACTCAGGTGCCACAATACCAATTATCCACTCAAAGGTCTCAAGTGGCAATATTCTCCTTGATGACACTTATACTGCCAAATTATTGTTTGATTTTAGGAATCTAAGTTTGAGTTCGATGCATGAAATTGGACTAGATCTTTATTATTTGGACCCAGAGTATATTCACACGGGCCAACTTACTGAGAAAAGTGATGTGTATGGTTTTGGTGTCGTTCTCGCCGAACTGATAATAGGGGAGAAAACAATTCATGTTGAGAAACCAGATGGAGGATTTCCCTTTCTTGCTAAGCAGTTCATCTTAACCTTGGAAAAGAATTGCTGGCTTGATATTCTTGAAACTGGGATTGTGAATAAAGAAAATGAAGACGAATTCATCCAAGTTGCTCTACTTGCAGCAAAGTGTTTGAGACTTCATGCAAAAGAAAGGCCTAGCATGGGAATGGTTGCAATGGAGTTGAAGAATATAAGACAGAAGCATCAAATCAAACACAATTCAGACCTAAGTTTGACCAAGAGTCTTCGCTTGTTTGACGATCCATCTGGCACATTTGAGCATGGCAGTAGTAGCACTAGCAGTGTCCAAAACAGTGGCTACGAATCGTGTACCGATTCAATGCAAGATGGATTGTATTCAGTAATATAA 1365 0.3941 MDLVTDGDVIKASREIHTIWKVAEITPIIASVNIIAVKLKGRSSAFVLLGNLEMEKGKVKDATEPLFRRWTSNPDCRSFLHIPEVSEKETNQLERQVLKKNGGPILQQKLLNAKIFTLEQLIKATNNFDERLIIGKGHISTVFKGILSNNRVVAIKKFRELDQNVIEEFIDWLVLLEQIRHRNVVPILGCCLESEVPLLVYEFFNNGTVFDHLHKEEKINLSWKTRLQIATEAARALDYLHSGATIPIIHSKVSSGNILLDDTYTAKLLFDFRNLSLSSMHEIGLDLYYLDPEYIHTGQLTEKSDVYGFGVVLAELIIGEKTIHVEKPDGGFPFLAKQFILTLEKNCWLDILETGIVNKENEDEFIQVALLAAKCLRLHAKERPSMGMVAMELKNIRQKHQIKHNSDLSLTKSLRLFDDPSGTFEHGSSSTSSVQNSGYESCTDSMQDGLYSVI* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0621 454 SUPERFAMILY Protein kinase-like (PK-like) 106 396 IPR011009 -
Ahy19g0621 454 Pfam Protein tyrosine and serine/threonine kinase 133 391 IPR001245 GO:0004672|GO:0006468
Ahy19g0621 454 Gene3D Phosphorylase Kinase; domain 1 87 203 - -
Ahy19g0621 454 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 86 405 IPR045274 GO:0007166
Ahy19g0621 454 Gene3D Transferase(Phosphotransferase) domain 1 204 416 - -
Ahy19g0621 454 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 9 86 405 - -
Ahy19g0621 454 ProSiteProfiles Protein kinase domain profile. 128 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0621 Ahy-Chr19 8236228 8238159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0621 77 405 Receptor kinase-like Gene Family AT3G25490 45.797 2.43e-86 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Ahy19g0621 PK_Tyr_Ser-Thr 5.20E-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0621 - - ahf:112777838 893.264