Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0619 ATGGCTCACTCTGTTGCATGCTCATCTCTGGTCTCCCCCAAAAGGTACGATGTATTTATTAGCTTCCGAGGGGAGGACATCCGCACCGGCTTCACCAGCCATCTTCATAAGGCTCTTACCAACAAGGGAATCGAAACATTCATAGATTATCAACTTGAAAGAGGAGATGGCATTTGGGATTCACTTTGTAAAGCAATCGAAAACTCATACATATCGGTGGTCGTCTTTTCTAGACACTACGCTTCCTCAACATGGTGCTTGAAAGAACTGGTGAAAATAATGGAGTGCAGAAAACATCTAGGGCTGCTTGTTATTCCTGTGTTCTACAATACAGATCCATCACAGGTACGCTATCAGAGAGAGACTTATCAGGAAGCTTTTTCTGAACAGGAACGGAATCTCCGGAACCGGAACGATGAATCCGAAGAGCGTAGGTGGAGGGCTGCTCTGGCTGAAGCCACAGATCTATCTGGATTCGACTCACAAAGTAGGGACGAATCTCTACTCATCAAGGACATTGTCAAAGATGTTTTGCAAAAGCTATTGGAATTTGGATATTCCAATACCACAAAAAGGCTTGTTGGAATCGAAGAAACTCGTAAACACGTTGAGTTATTACTCAAAAATGCTCAAAGAATTGGAATTTGGGGTATTGGGGGAATAGGAAAGACGACAATTGCTAAAGTTGTTACCATCCTCACTCCCCACTATGATAGTGTTTGCTTCTTGGAAAATATAACAGAAGAATCAAAATATGGCGAATTGGCATATTTACGTGGAAAGCTCTTGGAGCAACTAAAGCAAATTAATCCTATAGGTAAGGTTGTAGGAACTAAACTCACAACAAGAAGCCTGAAAAAAGCTCTCATTGTGCTTGATGGTGTGGATACTCTTGAGCAATTAGAGTACTTGTGTGAAGAGTCTAAAGTTCTTGATGACCTACCAGAAGATAGCAGAGTCATCATTACAACAAGAAATAGGTGTTTGCTTACTAACAAAGTAGATGAGATATACGAGGTCAAGGCATTGAGCCCTGAAGAATCTCTAAAGCTTTTTAGCCTTAGAGCCTTTAGGGAAATCCATCCCAAAGAGGGATATGAGGAACTCTCAAAACGAGCAGTAGAATATGCAGGAGGTATTCCATTTGCTCTAAATGCACTGGGTTCATATTTATCCTCTTCGAGATCACTGGATAAAGATTTTTGGGAAAGCACTATGAGAAAACTTGAAAACTCCCCTAATGTAGAAATTCAAGAGGTGTTAAGGTATTAG 1272 0.4096 MAHSVACSSLVSPKRYDVFISFRGEDIRTGFTSHLHKALTNKGIETFIDYQLERGDGIWDSLCKAIENSYISVVVFSRHYASSTWCLKELVKIMECRKHLGLLVIPVFYNTDPSQVRYQRETYQEAFSEQERNLRNRNDESEERRWRAALAEATDLSGFDSQSRDESLLIKDIVKDVLQKLLEFGYSNTTKRLVGIEETRKHVELLLKNAQRIGIWGIGGIGKTTIAKVVTILTPHYDSVCFLENITEESKYGELAYLRGKLLEQLKQINPIGKVVGTKLTTRSLKKALIVLDGVDTLEQLEYLCEESKVLDDLPEDSRVIITTRNRCLLTNKVDEIYEVKALSPEESLKLFSLRAFREIHPKEGYEELSKRAVEYAGGIPFALNALGSYLSSSRSLDKDFWESTMRKLENSPNVEIQEVLRY* 424
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0619 423 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
Ahy19g0619 423 Coils Coil 120 144 - -
Ahy19g0619 423 ProSiteProfiles TIR domain profile. 14 181 IPR000157 GO:0007165
Ahy19g0619 423 Gene3D - 178 337 IPR027417 -
Ahy19g0619 423 SMART till_3 15 156 IPR000157 GO:0007165
Ahy19g0619 423 Gene3D - 342 423 IPR042197 -
Ahy19g0619 423 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 422 - -
Ahy19g0619 423 Pfam NB-ARC domain 208 415 IPR002182 GO:0043531
Ahy19g0619 423 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 422 IPR044974 GO:0006952
Ahy19g0619 423 PRINTS Disease resistance protein signature 212 227 - -
Ahy19g0619 423 PRINTS Disease resistance protein signature 282 296 - -
Ahy19g0619 423 PRINTS Disease resistance protein signature 377 391 - -
Ahy19g0619 423 Pfam TIR domain 16 194 IPR000157 GO:0007165
Ahy19g0619 423 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 422 IPR027417 -
Ahy19g0619 423 Gene3D - 13 177 IPR035897 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy19g0619 Ahy-Chr19 8198068 8201648 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0619 12 389 WRKY Transcription Factor Family AT4G12020 27.461 1.71e-28 117