Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0580 ATGAGGACTGAATCTGACCTCATTGAAGGCATAGTCCAAATGATTATTCGGAAATTGGATCAGAAATACACAAATGAACTCAGGAGCCCTTTTATACATGATCAAAATTATGCTTGCATTGAATCTGTATTGATCAACTCACAGGAGGTTCGAACCATTGGAATTTGGGGCATGGGCGGCATAGGAAAAACAACTATTGCAGCTGCTATTTTTCAAGAGTTCTCTCCCAAATATGAGGGTAGTTGTTTCTTGGCCAATGTAAGAGAAGAATCTTCAAGGCATGGCCTCAACTACATTTTCAATAGACTTCTTTCTGAGTTGCTGCACGAACATGTTCATATTACCACTCCAAAGATTGTGTCTGCTGCTATACTCCGCAGATTGAGGCGTAAGAAAGTTTTCATTGTGCTAGATGATGTGAATACTTCTGAGCTTCTAGAAAATTTGCTTGGAGTGGGACAAGATTATCTTGGAGTTGGTAGCAAAGTTATTGTTACCACCAGAGATAAGCATGTTCTTCTGAGTAGATCGGTTGATCATATCCATCAAGTCACAGAAATGAATGATGAGAACTCTCTCAAACTGTTCAGCTTGAATGCCTTCAACAGAACCCATCCTCCTGAAAATGAATACTGGGAGCTATCAAAAAGGGCACTTGCTTATGCCAGAGGAAATCCTTTAGCTTTGAAAGTTTTGGGGTCATTTCTTCATTCCAAAACTGAAAAGGAATGGGACAATGCATTGACAAAACTAAAGAGGATTCCTAATGCAGATATTCAGAAGGTGTTGAGGTTGAGTTTCAATGAATTAGATGATACAGAGAAGGATATATTTCTAGATATTGCATGTTTTTTTAAAGGAGAAGAGAAAGAAAAAGTGATAAGAATATTGAATGAGTGTGGCTTCTTTGCAGATATTGGAATAAGAAACCTTTTAGACAAGGCTCTTATATCAATAGCTACCAATAAAAACATACAAATGCATGACTTGATACAGGAAATGGGTCACAAAATTGTGTGCGAAGAATCTCTCAAGAATCCTGGAAAGCGTAGTAGAGTGTGGCACCGAGATGAAATTTGCGACATATTAAAAAATGATGAAGGGTCCGCTACAATTGAAACCATATATTTGGATATGACTGAGCGGACAGAAATATGTATAAGCTCTGATGCACTTAGAAAGATGCCAAAGCTAAGGTTACTTGCTTTTGCTAACGACAATGGCTATGGACAAAAGAGAGTTGATTATACATTGAGTCTTCCAACAGCTCTGGAGTTGCCTAATAACTTGAGATACATTCAATGGGATGGATGTCCATTAAAATCTCTATCAACCACTTCTTGGCCAAGCAAGCTTGTTGAACTCTCCATGCCGTATAGTGATCTTGAAAAGCTTTGGGATGAGCCCCTGAGTTTACAACTTAACTTACATGGTCCATTGTATGCTGTTGCAGAATTTTCCAAGTTTGGAGCTAATTTATCTGGCTAG 1488 0.3837 MRTESDLIEGIVQMIIRKLDQKYTNELRSPFIHDQNYACIESVLINSQEVRTIGIWGMGGIGKTTIAAAIFQEFSPKYEGSCFLANVREESSRHGLNYIFNRLLSELLHEHVHITTPKIVSAAILRRLRRKKVFIVLDDVNTSELLENLLGVGQDYLGVGSKVIVTTRDKHVLLSRSVDHIHQVTEMNDENSLKLFSLNAFNRTHPPENEYWELSKRALAYARGNPLALKVLGSFLHSKTEKEWDNALTKLKRIPNADIQKVLRLSFNELDDTEKDIFLDIACFFKGEEKEKVIRILNECGFFADIGIRNLLDKALISIATNKNIQMHDLIQEMGHKIVCEESLKNPGKRSRVWHRDEICDILKNDEGSATIETIYLDMTERTEICISSDALRKMPKLRLLAFANDNGYGQKRVDYTLSLPTALELPNNLRYIQWDGCPLKSLSTTSWPSKLVELSMPYSDLEKLWDEPLSLQLNLHGPLYAVAEFSKFGANLSG* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0580 495 SUPERFAMILY "Winged helix" DNA-binding domain 258 364 IPR036390 -
Ahy19g0580 495 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 475 - -
Ahy19g0580 495 SUPERFAMILY L domain-like 327 471 - -
Ahy19g0580 495 Pfam NB-ARC domain 41 266 IPR002182 GO:0043531
Ahy19g0580 495 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 475 IPR044974 GO:0006952
Ahy19g0580 495 Gene3D - 13 182 IPR027417 -
Ahy19g0580 495 Gene3D - 186 271 IPR042197 -
Ahy19g0580 495 Pfam Leucine Rich Repeat 451 467 IPR011713 -
Ahy19g0580 495 SMART AAA_5 49 188 IPR003593 -
Ahy19g0580 495 Gene3D Ribonuclease Inhibitor 350 479 IPR032675 -
Ahy19g0580 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 281 IPR027417 -
Ahy19g0580 495 PRINTS Disease resistance protein signature 222 236 - -
Ahy19g0580 495 PRINTS Disease resistance protein signature 52 67 - -
Ahy19g0580 495 PRINTS Disease resistance protein signature 127 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0580 Ahy-Chr19 7643161 7645563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0580 39 466 WRKY Transcription Factor Family AT4G12020 36.659 7.84e-75 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0580 - - ahf:112708790 915.22