LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy19g0570	ATGGCACTTTCCCTTGCTTCTTCTTCTTCTTCCTCACCTCTTACTACTCGATATGATGTTTTTATCAGTTTCAGAGGCGAGGACACGCGTAACGGTTTTACCAGCCATCTTCATTCTGCTCTCCTCAGAAATCGGATCGAGACGTTCATAGATTACAGAATCCCGAAAGGAGGTGTCGTCTGGAACGAACTTGTTGAAGCCATCAGAGACTCAAAGTTGTTTGTTGTCATCTTCTCCGAAAACTATGCTTCGTCTAGCTGGTGCTTGAGAGAGCTGGTTGAGATCATGAAGTGCAAGAAAAAGAATGAACAAGTTATTGTGATTCCAGTGTTCTATAAAATAGAGCCCACACGTGTTCGCAAGCAGAGTGGAAGTTACCGCAGAGCCTTTGATGAGCATGAGAGATCCTCCAACCGTAAACATGTGCAGCAATGGAGGACGGCACTCACTGAAGCTTCGGATCTCTCTGGCTTCACTTGCAATCACCACAGGCAAGAAGCTGAGTTGATCGATGAGATTGTGAAAGCAATTTTTCCAAATCTGAATAGCAATTGCTATAGAGATGAACTCAAAAGCCCTTTTATTTGTAACAGAAACTATACTTCTGTTAAATCCTTATTGAAATTCAAGTCAGAGAAAGTTCTTGTGATTGGAATTTGGGGTATGGCCGGTATTGGCAAGACAACTATTGCTACTACTCTTCTTCATGAGTGCTCCTCAGAATACGAAAGTCATTGCTTCTTAGCCTTTTCAAAAAATTTAGAACGAAAAGGTCTTAATCACATATGCGCTAAACTTCTTTCTAGATTGTTAAATGAAGATCTTCGTATCGATAATATTCGAGTAATACACTCTAGTATTATCCGTAAAATCAAGCATAAGAAGGTTTTTGTTGTGCTAGATGATGTGACTAATTCACAAATTGCAGTTGATTTAATTCAACTCTTTCGTAACTGCCTGAGTTCTGGTAGTAAAATTATTTTGACAACAAAGGATAGAAATGTACTTACAAGTGGAGGAGTTGAAGAAATTCATGAAGTGAAGGAAATGAATTTTGAGGACTCTCTTAAACTTTTTAGCCATAATGCCTTTTGTGATTCTCATCCTAAAGAGGATTATTATGAGCTATCAACAAGAGTCGTAGCAGATTATGCCAAAGGAATACCATTAGCATTAAATATTTTGGGATCATTTCTTCGGACCAGAGGAAAAAGTGAATGGGATAGTGCATTGAGAAAATTACGAAGGTATCCCAATCCAGATATTCAGCAAGTGTTGAGATTGAGTTATGATGCATTAGATGATGATGAGAAAAACATCCTTTTAGATATTGCATGCTTTTTCCACGATCATGAGATGAAGAAAATAACAAGAATATTAAAGTCTTGTGGTTTCTATGCAGACATAGGGATAAAAAGTCTGTTGGACAAGTCTCTTGTAAGTATTTATTCAAATGGTCGTGATGAATGCATAAAAATGCATAGTTTGATACAGGAAATGTGTCGGAAAATCATTCATGAAGAATCTAGCAAAAATGGTGGTCGACAAATAAGACTGTGGAATACCGAAGAAGTCTGCAATATTTTTCAAAATGAAAGAGATATTTATGGAGTTGAAAGCATGATTGTGGATATGAATGAAATTACAATAGATCCACGTATAATCATCATTGCATTAAGAAAGATGCCAAAGTTAAGGTTACTTGCTTTAAGAGGAAATATCAACATGGATCTTGAAGGGAACAGAGTGTTTCTACAGGATTTTCAACTTCCTAATGACTTAAGGTATATTGAGTGGAATAAATGCCCACTTAACTTTGTGCGGTCGATTCCTTGGCCTCAAAAACTTGTTCAGCTTTCTATGCCAGATAGCAATGTTCAAAAACTTTGGGATACACCACAGAATCTACCAAGTTTGGAGATTATTGACCTCCGTGGCTGCAAACGCTTGATAGAGTGCCCAAATTTAGCAGGTGCCACGAATCTCAAATTAATATCACTCTATGGCTGTGAAAGCTTACAAGATGTTCATCCATCTATTTTCTCTCTCCCCAAGATTCAAAATCTATATGTGAACTTTTGCACATCCCTCAAGAGGCTTTGCAGTGGTTATTGTTCTCCCTCTCTCTGTACCTTGTGGGCCATTGGTTGCTGCAATTTGGAAGAGTTCTCAATCCCGATCATGAGTGATCATTCCAACCTCACGTTAATTTTACCAGCAACGGCTTTGACTGAAGTGCCATCCACTATTATGCATCTCAAAAATCTTGAGTGGTTCGGTTTTAACATCAGTTACTCTCTTCAGAAACTTCCTCTAAACTTTGCCTCCAAAATTTCGCTTAAGGATCCAATAAAACATGAAGATGACACATGCATCATGTTAAGTAGAATATTGCCCACCCCTGCCTTCTTGTCTCTCAAGCAATTATCTTTCTTCGAATGCAAGAGCTTGTCTAAACTCCCAGACAACATTCATGTCTTACAATCATTACAACTATTACATCTGCAAAGTTGTCATGTCATTACAAGTTTGCCAAAAAGCATTAAGAATCTTCAACAGCTCATGGGACTTGTGATCATGGATTGTAAAATGCTTCAATACGTACCTCCACTTCCCCCATCTATTATATACTTTAATGCACTAAACTGCAAATCTTTGGAGACACTCTCAAGTTTAACCAGTGAACCACCCAGAGAAGACCATGCATGGTTTGAATTCCATAACTGCACAAAGTTGGCTGATGATGCATATGAAGCAGTTTTGAAAGACTTGAAATCCAGGATAGAACTTGTGGCAAATAATGATGGATATCCGCATAATGAAGCAAGACACTTCTACTACTATTTACCAAGTAAAGAGAGCATAATTAATGAGTGGTTCCCTGACTACTACTCTAGAGAAGCTTCGATCATTGTTGAAGTTGCTCCAGATCACAAGATTTCTTCTTGTCTTGTTGGCTGCATCTTGATTTCTCAATACCAATCTTGCAACCTTACGAAGAAAAATGTGATATTTGGATGGGAATGCTACTTGGGAAAGGGTTGCAACGAGTGGGAATTGATCGCAACTTCTGCCGATGGAGTATCCTTGCACGGTTATTTTGTCGAAGGGATTCAATTGGAAATGGTATCAGATCATAAGGTAGTATGGTATGATGGAGAGGGTTCCAACAAGATAACGGAAGCAATCAAAGAGAGAAAGAGGGACACGGCTTGCAATCCTATCCTTAAATTTGAGTTCTATGCAAATACAGAAGATAATGAGAAAATAGTGATAAAGGGGTGTGGGATCCGTTGGATGCATGTCCATGTCAATGATGATGGAGAGATTAGTCCAGATGCCACTCATGAGGGATATGAATCTCATGACTCAGAGTTGGAGGACCTTGAGAGTGAGACTGTCAGAGAACGGAAAATCGGAAAAAGAGTGCATTTACATTGTGATTCCAAAGATTACTGTGATGGAGAACAGAGACAGAAAAAAAGATATAAAAAAAGAATACTCCAAGAATAG	3513	0.3843	MALSLASSSSSSPLTTRYDVFISFRGEDTRNGFTSHLHSALLRNRIETFIDYRIPKGGVVWNELVEAIRDSKLFVVIFSENYASSSWCLRELVEIMKCKKKNEQVIVIPVFYKIEPTRVRKQSGSYRRAFDEHERSSNRKHVQQWRTALTEASDLSGFTCNHHRQEAELIDEIVKAIFPNLNSNCYRDELKSPFICNRNYTSVKSLLKFKSEKVLVIGIWGMAGIGKTTIATTLLHECSSEYESHCFLAFSKNLERKGLNHICAKLLSRLLNEDLRIDNIRVIHSSIIRKIKHKKVFVVLDDVTNSQIAVDLIQLFRNCLSSGSKIILTTKDRNVLTSGGVEEIHEVKEMNFEDSLKLFSHNAFCDSHPKEDYYELSTRVVADYAKGIPLALNILGSFLRTRGKSEWDSALRKLRRYPNPDIQQVLRLSYDALDDDEKNILLDIACFFHDHEMKKITRILKSCGFYADIGIKSLLDKSLVSIYSNGRDECIKMHSLIQEMCRKIIHEESSKNGGRQIRLWNTEEVCNIFQNERDIYGVESMIVDMNEITIDPRIIIIALRKMPKLRLLALRGNINMDLEGNRVFLQDFQLPNDLRYIEWNKCPLNFVRSIPWPQKLVQLSMPDSNVQKLWDTPQNLPSLEIIDLRGCKRLIECPNLAGATNLKLISLYGCESLQDVHPSIFSLPKIQNLYVNFCTSLKRLCSGYCSPSLCTLWAIGCCNLEEFSIPIMSDHSNLTLILPATALTEVPSTIMHLKNLEWFGFNISYSLQKLPLNFASKISLKDPIKHEDDTCIMLSRILPTPAFLSLKQLSFFECKSLSKLPDNIHVLQSLQLLHLQSCHVITSLPKSIKNLQQLMGLVIMDCKMLQYVPPLPPSIIYFNALNCKSLETLSSLTSEPPREDHAWFEFHNCTKLADDAYEAVLKDLKSRIELVANNDGYPHNEARHFYYYLPSKESIINEWFPDYYSREASIIVEVAPDHKISSCLVGCILISQYQSCNLTKKNVIFGWECYLGKGCNEWELIATSADGVSLHGYFVEGIQLEMVSDHKVVWYDGEGSNKITEAIKERKRDTACNPILKFEFYANTEDNEKIVIKGCGIRWMHVHVNDDGEISPDATHEGYESHDSELEDLESETVRERKIGKRVHLHCDSKDYCDGEQRQKKRYKKRILQE*	1171

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy19g0570	1170	PRINTS	Disease resistance protein signature	290	304	-	-
	Ahy19g0570	1170	PRINTS	Disease resistance protein signature	216	231	-	-
	Ahy19g0570	1170	PRINTS	Disease resistance protein signature	385	399	-	-
	Ahy19g0570	1170	PRINTS	Disease resistance protein signature	634	650	-	-
	Ahy19g0570	1170	Gene3D	Ribonuclease Inhibitor	476	783	IPR032675	-
	Ahy19g0570	1170	Gene3D	-	15	187	IPR035897	-
	Ahy19g0570	1170	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	202	444	IPR027417	-
	Ahy19g0570	1170	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	13	1020	-	-
	Ahy19g0570	1170	SUPERFAMILY	L domain-like	492	890	-	-
	Ahy19g0570	1170	Pfam	TIR domain	18	184	IPR000157	GO:0007165
	Ahy19g0570	1170	Gene3D	-	188	342	IPR027417	-
	Ahy19g0570	1170	Gene3D	Ribonuclease Inhibitor	788	912	IPR032675	-
	Ahy19g0570	1170	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	13	1020	IPR044974	GO:0006952
	Ahy19g0570	1170	SMART	till_3	17	155	IPR000157	GO:0007165
	Ahy19g0570	1170	MobiDBLite	consensus disorder prediction	1110	1132	-	-
	Ahy19g0570	1170	Pfam	NB-ARC domain	204	420	IPR002182	GO:0043531
	Ahy19g0570	1170	SUPERFAMILY	Toll/Interleukin receptor TIR domain	7	158	IPR035897	-
	Ahy19g0570	1170	ProSiteProfiles	TIR domain profile.	16	181	IPR000157	GO:0007165
	Ahy19g0570	1170	Gene3D	-	350	434	IPR042197	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy19g0570	Ahy-Chr19	7460572	7472808	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy19g0570	18	863	WRKY Transcription Factor Family	AT4G12020	29.837	1.55e-79	285

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy19g0570	-		-	aip:107614877	1889.77