Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0558 ATGCTAGATTGGCTTAAGCGTTTCAACATTATCAGTGGCATTGCTCGGGGACTTCTTTATCTTCATCAAGATTCTAGACTGAGGATTATTCATAGAGACCTAAAAACTAGCAATATTCTGTTAGATGCAAATTTGAATCCTAAAATATCAGACTTTGGCCTAGCTCGGACATTCTTAGGCGATCAGCTCGAGGCTAACACGAACAGGGTAGCTGGAACATATGGTTATATGCCTCCCGAGTATGCAGTACATGGACAATATTCAATGAAGTCCGATGTTTTTAGCTATGGTGTCATACTACTAGAGTTGATAAGTGGGAAGAAGAATAGAGAATTTTCAGATCCAGAAAACTACCTTAACCTTCTTGGACATGCATGGAGATTATGGACTGATGAGAAGCCATTGGAACTGCTAGATGAAGTGTTAAAGGAAGGATGCACACCACTTGAAGTAAAAAGATGCATTCAAGTGGGCCTCTTATGTGTGCAACAAAGACCAGAAGATAGGCCAGACATGTCTTCAGTGGTTCTAATGTTGAATGGTGAGAAATTACTGCCCAAGCCAAAGGTTCCTGGTTTTTATACTGAAAGAGGTGTTACACTTGAAGCAGATTCTTTGATGGAAAATCACACATTGTTTTCAGCCAATGAAATCTCCATCACAACATTATATGCAAGATAG 681 0.3965 MLDWLKRFNIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLNPKISDFGLARTFLGDQLEANTNRVAGTYGYMPPEYAVHGQYSMKSDVFSYGVILLELISGKKNREFSDPENYLNLLGHAWRLWTDEKPLELLDEVLKEGCTPLEVKRCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKLLPKPKVPGFYTERGVTLEADSLMENHTLFSANEISITTLYAR* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0558 226 Pfam Protein kinase domain 9 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0558 226 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0558 226 Gene3D Transferase(Phosphotransferase) domain 1 1 186 - -
Ahy19g0558 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 29 41 IPR008271 GO:0004672|GO:0006468
Ahy19g0558 226 SUPERFAMILY Protein kinase-like (PK-like) 2 179 IPR011009 -
Ahy19g0558 226 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 223 - -
Ahy19g0558 226 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 223 - -
Ahy19g0558 226 SMART serkin_6 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0558 Ahy-Chr19 7292619 7294698 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0558 2 226 Receptor kinase-like Gene Family AT4G23140 55.508 5.45e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy19g0558 Pkinase 1.50E-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0558 - - aip:107614885 458.759