Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0556 ATGGTGAGCAGCATAACAACATTACTTCTTTGGTTCTTTCTTACATCCCACATGATAACTGTCACATCAACAGACAGTTTAGCAATGAGTCAATGTATTCGAGATGGCGAAACGTTAATCTCGGCCGGCCGAAATTTTGAGCTGGGTTTCTTTAGCCCCGGAATTTCAACAAGTCGATATTTGGGTGTGTGGTACAGAGCTTCATCAGGGAATGCAACAATTGTGTGGGTGGCAAACAGAGAAAACCCCCTTCACAACAAGTTAGGAACTTTAAGGTTAAACAACAAGGGGATTCTTGAGCTTCTTAGTAACACAAATAAAACCATTTGGTCATCCAACATCATAGCAAGCAAAACCAAAGCCACGAGTAGCTCAATTGTACAACTCTTGGATACAGGAAATCTTGTAGTGAAAAATGGACAAGATACTAATAATGAGGACAATCCTTTGTGGCAAAGTTTTGATTATCCTGGCGACACATTGATGCCAGGAATGAAGGTTGGATTGAACTTTGTTACTGGGAAGAATGCATCTCAATCATGCTGGAAAAGCGACGAGGATCCTGCTGTGGGAGAATATTCTCTAAAATTTGATCCTAGAGGATATCCACAATTGATGCAGATGAAAAGATCTGCAATAAGTATCAGACGAGGGTCATGGAATGGCCGTTATTTTACTGGATCTCCAGCTGAGGACATGCATGAATTTAAAACTGATTTTGTGTTCAACAAAGAAGAGGTCTATTATGAGTTTGAAATTCTTGATAGATCAATCTTCTCTGTATTCAAAATGGACCCTTCTGGGAATACACAAATTATGGTTTGGGAAATTCAAACAAGAATTCCAGTGGAAGTTTCCATGATCAATGGACCAAATGCATGTAAAAGTTATGCATTTTGTGGTCAAAATTCTTGGTGCTTTATGGATGGCAATTTTGCTGTATGCCAATGCATGAAAGGTTATACTCCCAAGTTTCCTGAACAATGGAATACATCACAGTGGTCTGGTGGTTGTGTTAGAAAGACTCCATTGAAGTGTAATGATACAAATGGATTCTTCATGTATGAGTACATGAAAATGCCGGACACATCTTCTTCATGGTTTAGCGAGACCATGAACCTCGAGGAATGTGGAAAATCATGCCTGGAAAATTGTTCATGTGTTGCATATGCAAGTTTGGATATCCGAAATGGAGGAACTGGTTGTCTACTTTGGTTTGATTATCTTGTTGATGTGATGCAATTTTTTAAGGCCGGTCAAGATCTTTATATTAAAGTCCCTGCATCAGAATTAGGTACCTATTGTATTTCCCCTTCATTTCTCTTTTTTCATATTTACCATGGACACAACAAGAAAATTAAAGTGGGAATTGCAGCTGGTGTCATTGTCTTCGGATTAATCACAATTGTCAGCATAATGATAATTACAAAACCAGGGGCAACAAGGATATTATGCAGAAGGTGGCAACGACGAGAAAACATTGATCTACCAACATTTGATTTCTCAATCCTAGCTAAAGCTACAGAAAACTTTTCAAGTTGCAACAAACTTGGAGAGGGTGGTTTTGGACCAGGCACATTGTCAGATGGTCAACATTTAGCTGTGAAAAGGCTTTCAAAAAAGTCTACACAAGGATTGGAGGAGTTTAAAAATGAAGTGGTATTGATAGCCAAACTTCAACATCGCAATCTTGTGAAACTTCTTGATGAAATAAGGAGGAAGCTACTCAATTGGCATAAGCGTTTCGACATTATTAGTGGCATTGCTCGTGGACTTCTTTATCTTCATCAAGATTCTAGACTAAGGATTATTCACAGAGATCTAAAAACCAGCAATATTTTATTAGATGCAAATATGAATCCAAAAATATCAGACTTTGGTCTAGCAAGAACATTCTTAGGAGACCAAGCAGAGGATAAGACAGACAGAGTAGTTGGAACATATGGCTATATGCCTCCGGAGTATGTAGTGCACGGACAATTCTCAATGAAGTCAGATGTTTTTAGCTATGGTGCGATTGTATTAGAGTTGATAAGTGGGAAGAAAAATAGACAGTTCTCAGATCCAGAACACAACCTTAATCTTCTTGGGCATGCTTGGAGATTATGGTCTAATGAGAGGCCATTGGAACTATTAGATGAAGTATTAAAGGAAGGATGCACCCGTTCTGAAGTCATACGATGCATACAAGTGGGTCTGTTATGTGTGCAGCAAAGACCAGCAGATAGACCAAACATGTCATCAGTGGTTCTAATGCTAAATGGTGAGAAATTGTTGCCCAAGCCAAAAGTTCCCGGTTTTTATAATGACAGAAGTGTTACACTTGAAACAGATTCTTTGTTGAAAAATTACACATCATTTTCAACCAATGAAATTTCTAACACTATGTTAGATGCAAGATAG 2403 0.3841 MVSSITTLLLWFFLTSHMITVTSTDSLAMSQCIRDGETLISAGRNFELGFFSPGISTSRYLGVWYRASSGNATIVWVANRENPLHNKLGTLRLNNKGILELLSNTNKTIWSSNIIASKTKATSSSIVQLLDTGNLVVKNGQDTNNEDNPLWQSFDYPGDTLMPGMKVGLNFVTGKNASQSCWKSDEDPAVGEYSLKFDPRGYPQLMQMKRSAISIRRGSWNGRYFTGSPAEDMHEFKTDFVFNKEEVYYEFEILDRSIFSVFKMDPSGNTQIMVWEIQTRIPVEVSMINGPNACKSYAFCGQNSWCFMDGNFAVCQCMKGYTPKFPEQWNTSQWSGGCVRKTPLKCNDTNGFFMYEYMKMPDTSSSWFSETMNLEECGKSCLENCSCVAYASLDIRNGGTGCLLWFDYLVDVMQFFKAGQDLYIKVPASELGTYCISPSFLFFHIYHGHNKKIKVGIAAGVIVFGLITIVSIMIITKPGATRILCRRWQRRENIDLPTFDFSILAKATENFSSCNKLGEGGFGPGTLSDGQHLAVKRLSKKSTQGLEEFKNEVVLIAKLQHRNLVKLLDEIRRKLLNWHKRFDIISGIARGLLYLHQDSRLRIIHRDLKTSNILLDANMNPKISDFGLARTFLGDQAEDKTDRVVGTYGYMPPEYVVHGQFSMKSDVFSYGAIVLELISGKKNRQFSDPEHNLNLLGHAWRLWSNERPLELLDEVLKEGCTRSEVIRCIQVGLLCVQQRPADRPNMSSVVLMLNGEKLLPKPKVPGFYNDRSVTLETDSLLKNYTSFSTNEISNTMLDAR* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0556 800 SMART serkin_6 511 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0556 800 Gene3D Hepatocyte Growth Factor 343 423 - -
Ahy19g0556 800 SMART blect_4 30 157 IPR001480 -
Ahy19g0556 800 PIRSF SRK 1 569 IPR024171 GO:0004674
Ahy19g0556 800 PIRSF SRK 567 800 IPR024171 GO:0004674
Ahy19g0556 800 Pfam Protein kinase domain 514 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0556 800 SMART ntp_6 347 426 IPR003609 -
Ahy19g0556 800 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 19 797 - -
Ahy19g0556 800 SUPERFAMILY Protein kinase-like (PK-like) 496 769 IPR011009 -
Ahy19g0556 800 Gene3D Transferase(Phosphotransferase) domain 1 566 756 - -
Ahy19g0556 800 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 797 - -
Ahy19g0556 800 Pfam S-locus glycoprotein domain 216 325 IPR000858 GO:0048544
Ahy19g0556 800 ProSiteProfiles Protein kinase domain profile. 511 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0556 800 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Ahy19g0556 800 Pfam D-mannose binding lectin 73 183 IPR001480 -
Ahy19g0556 800 ProSiteProfiles PAN/Apple domain profile. 346 428 IPR003609 -
Ahy19g0556 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Ahy19g0556 800 CDD B_lectin 33 157 IPR001480 -
Ahy19g0556 800 Pfam PAN-like domain 346 412 IPR003609 -
Ahy19g0556 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 188 IPR036426 -
Ahy19g0556 800 Gene3D - 18 154 IPR036426 -
Ahy19g0556 800 CDD PAN_AP_plant 342 427 - -
Ahy19g0556 800 Gene3D Phosphorylase Kinase; domain 1 485 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0556 Ahy-Chr19 7284837 7289244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0556 499 768 Receptor kinase-like Gene Family AT4G23140 52.941 3.41e-104 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy19g0556 Pkinase 8.80E-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0556 - - ahf:112776722 1641.32