Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy19g0538 | ATGGCTTACTATGGGAACACGATAGGTGATGATTTCACATCATGGAGTAGTTGTCTAAAGAACTTTGATTTCACTTCATTATGTACTCAAAGAAGCATAGTGGGGATCACAAATCTACTTTTTGTGTTTATGTTCTACACCGTTTTGCTTATTAGTTTCATCAAAAGAAGTTCTTCAAGAAATGGCAATACTAGCGACAGAAGAAAGAACAAGTTTTTCATATTTGTATCAGTTTGTTGTGCTCTTATCAGCATTGGTTTTGTCACAATTGGTCTATGGAATCACATGAGCTTGTTATCTTACATTGTAAGAGGGATTGTTTGGATCTCTTTATCATTTTCCTTGATTCTTCAGAGACAAAAATGGGTGAAGACTCTCAGCACTTTCTGGTGGATATGTTCTTCTATTTTGGTGTCAATTTTGGATATTGAAATTCTTTTCAAGGATCATGCAATTGAGGTTCTTGATGTGGTGCTTTGGCTTGTGAATTTGTTACTTCTATTATGTGCTTTTCAAAATCTTGGTTTCTTTGTCACACAAAGTGATGATAACCAAGGTGATGCAGATTTATCTGAGCCTCTTTTGGATCGAAAAGACGGCGAAAATGCACGAACAGGACTATGCAATGCTTCCATTTTGAGTAAATTGATCTTCTCTTGGATTAACCCTTTGCTCAAATTGGGTTACTCAAAGGCACTATCACTTGAAGACATTCCTTCAGTTGTTCCTGAAGATGAAGCAGATTCTGCACACCAAGTGTTTGTTCTTGCATGGGAGAATCTTTTAAAGGAAAAGAGAAAGAACAATAATAATAGTACCAAGAACTTGGTTCTTTGGTCTCTAGCTAGAGTTTACTTAAAAGAGAATCTTTTGATTGCAGTCTATGCATTGATTAGAACTGTTTGTGTTGTGGTTTCTCCACTTATACTCTATGCTTTTGTGAACTATTCAAATAGAAGTAGCACTGAGAAAAATCTCAAAGATGGTCTTTCTATATTGGGGTGTTTGATTGTCACAAAGGTGTTTGAAACATTGTCTCAAAGACATTGGTTCTTTGATTCAAGGAGATCAGGTATGAAGATGAGGTCTGCTCTGATGGTGGCAGTGTATCAGAAACAGCTAAGGCTTTCTAGCCCTGCTCGAATGAGGCACTCCGCCGGCGAAATTGTTAATTACATTGCGGTGGATGCATACAGAATGGGAGAGTTTCCTTGGTGGCTTCATGTAACATGGGCCTGTGTATTGCAGCTTATTATGTCTCTTATAGTCTTGTTCGGTGTTGTAGGTCTCGGTGCTCTGCCTGGCCTAATCCCTTTCATAATCTGTGGACTACTCAATGTGCCATTTGCAAAGGTGATACAAAAGTCTCAGTCTCAGTTCATGTTAGCACAAGATGAGCGCTTAAGATCAACTTCAGAGATACTTAACAGCATGAAGATCATCAAGTTACAATCATGGGAAGAAAAATTCAAGAGCTTGGTTGAGTCGCTTCGCGCGAAAGAATTCATATGGTTGTCTAAGACACAGATCATGAAGGGTTATGGCTCAATTCTTTATTGGATGGCTCCTACAATTGTTTCTGCTGTTGTCTTCCTCGGATGTGTTCTGTTCCATAGTGCTCCATTGGATGCAGGGACAATTTTCACAGTTCTTGCAACATTGAGGATCATGTCGGAACCAGTTAGGATGATCCCTGAGGCTCTCTCTGTTCTTATCCAAGTTGTGGTATCTTTCGATCGGCTTAATACCTTTTTGCTTGCTGAAGAGTTAGGCAGTAATGAAATTGTAAGGAGTGTTAAGCAAAGTTCAGTTGGTGACAACAATGCTGTAGAAATTGAAGGTGGAAACTTTACTTGGGATCAGGGGTCAGTGTCCCCAACTTTAGCTGATGTGAATTTGGAAGTGAAATGGGGGCATAAAGTAGCAGTTGTTGGGCCAGTTGGAGGTGGAAAATCATCTCTCTTGCATGCAATACTTGGAGAGATTCCAAAGATTTCAGGAAATGTTAATGTATATGGCACCATAGCATATGTTTCTCAAATTTCTTGGATCCAAAGTGGGACAGTTAGAGATAACATACTCTTTGGCAAGCCAATGGACAAGAAAAGATATCAGAATACCATTAAGGCCTGTGCCTTGGATAAGGACATCAATGATTTCAGCCATGGCGATCTGACAGAAATCGGTCAGCGAGGGATCAACATGAGTGGAGGACAAAAGCAAAGGATCCAACTAGCTAGAGCAGTGTACAATGATGCTGACATTTATCTCTTTGATGATCCTTTCAGTGCAGTTGATGCGCACACTGCTGCTCATTTATTCAATGAATGTGTCATGACAGCTCTTAGGGAAAAAACAGTCATTCTAGTGACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATAAAATCCTGGTGATGGAGGGAGGGAGAATTACTCAGTCAGGTAGTTATGATGATATCCTAACAGCCGGGACAGCATTCGAACAACTTGTGACTGCTCACAAAGATGCAATAACAGAGTTTGATCGGAACAACCAAAACCAAGGAGGACCTGAAAATAATAAGGCTATGACTCCTCCAGAAGAGTCTCAAGGTTCTAATATCTCTAAAACTCAAAGTGAGGGTGAGATTTCTTTCAAGGGTCAAACTGGCTCACAACTCACACAAGAGGAAGAGACAGAGATTGGTGATCTTGGGTGGAAGCCATTTTGGGATTACATTTCCTTCTCCAAGGGGCAACTTATGCTGTGTTTGATGATATTAGGACAATTTGCTTTTGTTGCTTTGCAAGCTGCTTCAACCTTTTGGCTTGCACTAGCAATTGAGATGCCAAAAGTGACTAGTGCTGTTTTGATTGGGGTTTATGCATTGGTGTCATTTAGCAGTGCTATTTTTGTGTATCTGAGGTCTTTGGTATCTGCACTTCTTGGATTAAAAGCTTCATCAGCCTTCTTCTCTAGTTTCAATAAGGCTATCTTCAATGCTCCTATGTTGTTCTTTGATTCAACCCCTGTAGGAAGGATTTTAACCCGAGCTTCATCAGATTTGAGTATTCTGGATTTTGACATACCTTATTCCATCACTTTTGTAGCATCTGTAGCTATTGAAATTGTGGTGATCATTGGTATAATGGCTTCAGTCACATGGCAAGTTCTAATAGTTGCAATTCCTGCTACACTAGCATCAAAATATGTTCAGGGATATTATCAAGCCTCTGCAAGAGAAATAATAAGGATCAATGGAACAACCAAAGCACCAGTGATGAATTTTGCAGCTGAGACATCACTTGGAGTGGTTACTGTTAGAGCATTCAACATGGTGGATAGATTTGTCAAGAACTACCTAAAGCTTGTGGACACAGATGCATCACTATTCTTTCATTCTAATGTGACCATGGAATGGTTAATTGTAAGGATTGAAACACTTCAAAACTTGACAGTCTTCACTGCAGCCTTGTTACTTATTCTAGTTCCTATGGATTATGTGTCCCCAGGGCTTGTGGGACTTTCACTTTCTTATGCATTCACATTGACACAAGCACAAATATTTTGGACAAGATGGTTTTGCAACTTATCAAACTATGTTATCTCTATTGAAAGAATCAAACAATTCATTCACATACCAGCTGAGCCTCCTGCTATTGTGGAGGATAACAGGCCTCCAACTTCATGGCCATGGAAGGGTAGAATTGATCTTCAATCCTTAGAGATTAGATATCGTCCGAATGCACCAATAGTCCTGAAAGGGATCACTTGCACATTCAAAGAAGGGAGTAGAGTGGGAGTTGTAGGAAGAACAGGAAGTGGAAAAACAACACTTATAAGTGCTCTGTTTCGATTGGTTGAGCCTTCAAGAGGTAACATTATTATTGATGGGATTGACATATGCTCATTGGGGTTGAAGGATTTGAGAATGAAGCTTAGTATTATCCCTCAAGAAGCAACTCTTTTCAAGGGTAGCATTAGAACAAACTTGGACCCCTTAGGCCTTTACTCAGATGATGAAATATGGAAGGCTTTAGAGAAGTGTCAACTTAAGGAGACAATCAGCAAGCTACCAAGTCTCTTAGACTCATCAGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAGCGGCAACTGTTTTGTCTTGGAAGAGTACTTCTTAAGAGGAACAGAATTCTTGTTCTTGATGAAGCAACTGCATCCATTGATTCTGCTACAGATGCCATTCTACAAAGAATTATTAGAGAAGAATTTGCAGAATGCACTGTAATAACTGTGGCTCACAGAGTTCCAACTGTTATAGACAGTGACATGGTCATGGTCCTATCTTATGGGAAACTATTGGAATATGATGATCCTTCAAAGCTTATGGAGACAAACTCATCATTCTCTAAGCTTGTAGCTGAATATTGGGCAAGTTGCAAGAGGAGTTCTCAAATCTAA | 4428 | 0.3972 | MAYYGNTIGDDFTSWSSCLKNFDFTSLCTQRSIVGITNLLFVFMFYTVLLISFIKRSSSRNGNTSDRRKNKFFIFVSVCCALISIGFVTIGLWNHMSLLSYIVRGIVWISLSFSLILQRQKWVKTLSTFWWICSSILVSILDIEILFKDHAIEVLDVVLWLVNLLLLLCAFQNLGFFVTQSDDNQGDADLSEPLLDRKDGENARTGLCNASILSKLIFSWINPLLKLGYSKALSLEDIPSVVPEDEADSAHQVFVLAWENLLKEKRKNNNNSTKNLVLWSLARVYLKENLLIAVYALIRTVCVVVSPLILYAFVNYSNRSSTEKNLKDGLSILGCLIVTKVFETLSQRHWFFDSRRSGMKMRSALMVAVYQKQLRLSSPARMRHSAGEIVNYIAVDAYRMGEFPWWLHVTWACVLQLIMSLIVLFGVVGLGALPGLIPFIICGLLNVPFAKVIQKSQSQFMLAQDERLRSTSEILNSMKIIKLQSWEEKFKSLVESLRAKEFIWLSKTQIMKGYGSILYWMAPTIVSAVVFLGCVLFHSAPLDAGTIFTVLATLRIMSEPVRMIPEALSVLIQVVVSFDRLNTFLLAEELGSNEIVRSVKQSSVGDNNAVEIEGGNFTWDQGSVSPTLADVNLEVKWGHKVAVVGPVGGGKSSLLHAILGEIPKISGNVNVYGTIAYVSQISWIQSGTVRDNILFGKPMDKKRYQNTIKACALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLFDDPFSAVDAHTAAHLFNECVMTALREKTVILVTHQVEFLSEVDKILVMEGGRITQSGSYDDILTAGTAFEQLVTAHKDAITEFDRNNQNQGGPENNKAMTPPEESQGSNISKTQSEGEISFKGQTGSQLTQEEETEIGDLGWKPFWDYISFSKGQLMLCLMILGQFAFVALQAASTFWLALAIEMPKVTSAVLIGVYALVSFSSAIFVYLRSLVSALLGLKASSAFFSSFNKAIFNAPMLFFDSTPVGRILTRASSDLSILDFDIPYSITFVASVAIEIVVIIGIMASVTWQVLIVAIPATLASKYVQGYYQASAREIIRINGTTKAPVMNFAAETSLGVVTVRAFNMVDRFVKNYLKLVDTDASLFFHSNVTMEWLIVRIETLQNLTVFTAALLLILVPMDYVSPGLVGLSLSYAFTLTQAQIFWTRWFCNLSNYVISIERIKQFIHIPAEPPAIVEDNRPPTSWPWKGRIDLQSLEIRYRPNAPIVLKGITCTFKEGSRVGVVGRTGSGKTTLISALFRLVEPSRGNIIIDGIDICSLGLKDLRMKLSIIPQEATLFKGSIRTNLDPLGLYSDDEIWKALEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQRIIREEFAECTVITVAHRVPTVIDSDMVMVLSYGKLLEYDDPSKLMETNSSFSKLVAEYWASCKRSSQI* | 1476 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy19g0538 | 1475 | Pfam | ABC transporter transmembrane region | 291 | 560 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Ahy19g0538 | 1475 | Pfam | ABC transporter transmembrane region | 947 | 1179 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Ahy19g0538 | 1475 | Gene3D | - | 1213 | 1464 | IPR027417 | - | |
Ahy19g0538 | 1475 | CDD | ABCC_MRP_domain1 | 610 | 810 | - | - | |
Ahy19g0538 | 1475 | MobiDBLite | consensus disorder prediction | 842 | 891 | - | - | |
Ahy19g0538 | 1475 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1232 | 1464 | IPR003439 | GO:0005524 | |
Ahy19g0538 | 1475 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 918 | 1180 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Ahy19g0538 | 1475 | Gene3D | ABC transporter type 1, transmembrane domain | 879 | 1211 | IPR036640 | GO:0005524|GO:0016021 | |
Ahy19g0538 | 1475 | Gene3D | ABC transporter type 1, transmembrane domain | 258 | 585 | IPR036640 | GO:0005524|GO:0016021 | |
Ahy19g0538 | 1475 | Pfam | ABC transporter | 628 | 762 | IPR003439 | GO:0005524 | |
Ahy19g0538 | 1475 | PANTHER | NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED | 96 | 1473 | - | - | |
Ahy19g0538 | 1475 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 607 | 832 | IPR027417 | - | |
Ahy19g0538 | 1475 | SUPERFAMILY | ABC transporter transmembrane region | 278 | 581 | IPR036640 | GO:0005524|GO:0016021 | |
Ahy19g0538 | 1475 | ProSitePatterns | ABC transporters family signature. | 735 | 749 | IPR017871 | GO:0005524 | |
Ahy19g0538 | 1475 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 610 | 833 | IPR003439 | GO:0005524 | |
Ahy19g0538 | 1475 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1219 | 1463 | IPR027417 | - | |
Ahy19g0538 | 1475 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 290 | 573 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Ahy19g0538 | 1475 | SMART | AAA_5 | 1256 | 1449 | IPR003593 | - | |
Ahy19g0538 | 1475 | SMART | AAA_5 | 637 | 810 | IPR003593 | - | |
Ahy19g0538 | 1475 | Gene3D | - | 586 | 856 | IPR027417 | - | |
Ahy19g0538 | 1475 | CDD | ABC_6TM_ABCC_D2 | 914 | 1205 | IPR044726 | GO:0140359 | |
Ahy19g0538 | 1475 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 96 | 1473 | - | - | |
Ahy19g0538 | 1475 | Pfam | ABC transporter | 1247 | 1395 | IPR003439 | GO:0005524 | |
Ahy19g0538 | 1475 | SUPERFAMILY | ABC transporter transmembrane region | 901 | 1212 | IPR036640 | GO:0005524|GO:0016021 | |
Ahy19g0538 | 1475 | CDD | ABC_6TM_ABCC_D1 | 291 | 581 | IPR044746 | GO:0140359 | |
Ahy19g0538 | 1475 | CDD | ABCC_MRP_domain2 | 1228 | 1448 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy19g0538 | Ahy-Chr19 | 6812034 | 6819021 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy19g0538 | 610 | 854 | Calmodulin-binding Proteins | AT2G36910 | 25.283 | 1.07e-19 | 94.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy19g0538 | - | - | gmx:100784827 | 2101.63 |