Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0537 ATGTCATTTCATTCATTGATTTTCTTTATTTTTATTTTTTTCTCAGGAACATGTCTTGGAAATTTCAGTTGGACTTCAATTTCCACTCAAAGGACTATAATAGACACAACCAACCTAATTTTTCTATGTATTTTCTATATATCTTTGTTCATAAATTTGATAATGAGAATCCCTAGTGGTAGCTCCAGAAAGGGGTGGCTTCATTTAGTTACTTCACTCTGTTGTGCTTTTTTGAGCACTACCTGTTTGATTAATTGCTTATGGAGTCTCATAGCCAAATCTAATGGTTCCAATCAGCTGAGTTTGATTTACTTTATAAGATCACTGGTTTGGATTTCCTTAACTGTTTCTTTCCTTGTTCAGAAATCCCAATGGACTAAAATTTTAACCACTATTTGGTGGGTGTGTTCATGTGCATTGGTCTCAGCACTAAACATTGAAATTCTAGTTAGAGAGCAAAAGCTTGAGATTTATGATATGATGATATGGCCAGTACATATTCTGCTTGTGATCTATGATTTCCATAACCATGGCTACTTTGTTCAACAACAAGTCTCAGATTCTAGTTTATCTGATCCTTTACTAGCTCATAAGGTTGAGCATAATCAAGAAACAGAATTAGGCCATGGCAACATTCTCAATAGAATGACATTCTCTTGGATCAATTTGTTACTGAAATTGGGTTACTCAAAGCCACTAACACTTGAAGACATCCCTTCCCTTGCTTCTGAAGATGAAGCTGAGATTGGTTATCAAAAGTTTGCTCATGAATTGGACTCCCTTTTGAGGGAGAGGAGCAAGAATGATTCTACAAACTTGGTTCTTTGGTTGATCGCGCGAGTTTACTTTAAAGAAAACATATTTATAGCCATTTGTGCGGTTCTCAGGACAATTTGTGCTGTAGCTTCTCCCTTACTTGTCTATTCCTTTGTGAAATACTCCAATTCCATTGAGCAAGACTTGAAATGGGGACTAACCATAGTGACATGTCTAGTACTTGCCAAGGTGGTTGAGTCTATGTCTCAGAGGCATTGGTTTTTCAACTCAAGGAGGTCAGGGATGAAAATGAGATCAACTTTAATGGCAGCAGTATATCAGAAGCAGTTAAAGCTTTCTGTTTGGGGTAGGAGAAGGCATTCAACTGGTGAGATAGTGAATTATATTGCGGTTGATGCATATCGAATGGGAGAATTTCCATGGTGGTTTCATATAGCCTGGAGTTCTGCCTTGCAAGTTTTTCTGGCTGTTTGTGTTCTTTTTGGTGTTGTTGGTCTTGGTGCACTTCCTGGTTTAGTCCCTCTTCTCATTTGTGGAATCATCAATGTTCCATTTGCAAAGATCCTACAAAGATGTCGTTCTGAGTTTATGGTTATACAGGATGAGCGTCTGAGATCAACTTCAGAGATTCTAAGTAGCATGAAAATCATAAAGTTACAATCATGGGAGGAAAAGTTCAAGAAACTAGTTGAATCGCTTCGCGCTAGAGAGTTCAAATGCTTGACTAAGGCACAGTTAATGAGAGCTTTTGGGGCATTCATTTATTGGATGTCTCCTACCATAATCTCTTCTGTTATCTTCATGGGGTGTGTTCTTTTCCAAAGTGCACCTTTGAATGCTGAAACCATCTTCACAATTCTTGCAGTATTGAAAAGCATGGGAGAACCTGTTAATCTGATTCCAGAGGCACTATCTGTTCTTATCCAAGTCAAAGTCTCCTTCGATCGCCTCAACGCATTTTTGCTGGATGATGAGATAAAAGTTGATGATGGTAGAAGAAATGCAACACTGAGTTCTTGTAACAGTGTTGAAATTATTGCAGGAAATTTCAGCTGGAATGAGGAATCATTGCATCCAACTCTGAGAGATGTGAAACTAGATATAAAATGGGGTCAGAAAATAGCAGTTTGTGGACCAGTTGGAGCTGGAAAAACAGCTCTCTTATATGCAATTCTTGGAGAAATACCAAAAGTTTCAGGAACAGTTAGTGTGGGTGGAACTTTTGCATATGTTTCCCAAATTCCTTGGATCCAAAGTGGTACCATTCGCGATAATATCCTCTATGGAAAGCCTATGGAGAAAACCAGATATGAATATAGCATTAAGGTATGTGCCTTGGATAAGGATATTGATGGATTCAGCCATGGTGATCTCACAGAAATCGGTCAGCGGGGGATCAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTCGCTCGAGCCGTCTATAGTGATGCAGATATCTATCTCCTTGATGACCCTTTTAGTGCTGTAGATGCTCATACTGCTTCCATTCTGTTCAATGATTGTGTGAAGACTGCTTTAAGAAGCAAAACTGTTATTCTAGTGACTCATCAAGTTGAATTTCTCTCAGAAGTTGATCAAATTCTGGTGATGGAGAGAGGAGAAATAACTCAATCAGGAAGTTATAAAGATCTTTTGATTGCTGGAACAGCCTTTGAACAACTATTGAATGCTCACAGAGATGCAATCACAGGGATGAAGAAAAGGAATGAGAAGGAGAGAGTTCTTGAAAATAAAGTTGCAGTTCATCAAGAGGATTCACATGGTTTGAATCTTGCAAACCGTGGAAGTGAAGCTGACATTTCCTCTAAAGTTCAACTTACACAAGAGGAAGAAAAGGAGATTGGTGATATTGGATGGAAGACATTCTGTGATTACATTTTATTCCCTAAGGGATCATGGCTTCTATGCTGTTGCATATTAGAACAATTCTCTTTTGTTGGTCTGCAAGCTGCATCAACTTTTTGGCTTGCACTAGCAATTGAGATACCAAAAGTAACAAGTAGCATATTGATTGGAGTTTATGCTGTGATTTCCTTTTTAAGTGTTGTATTTTCATATCTAAGGTCTCTCTTTGGTGCACGCCTTGGTTTGAAAGCTTCTAAGGCTTTCTTCTCTGCTTTCAATGATGCCATCTTTGGTGCTCCTATGTTGTTCTTTGACTCAACACCTGTAGGGAGGATTCTAACCAGAGCTTCATCAGATTTTAGTATTTTGGATTTCGATATGGCTTTCGCAACCTTCTTTGTAATAGGCGAAATAATTGAACTTTCAACAATGATTGGGATCATGGTTTCAGTCACATGGCAAGTTCTCATTGTTGCCATTCTTGCACTGGCGGCTTCAAAATATCTTCAGGGTTATTATCAAGTTTCTGCAAGGGAACTTATGAGAATCAATGGAACTACAAAAGCTCCTCTTATGAATTTTACAGCTGAGACATCACTTGGTGTGATTACTATAAGGGCTACCAAGATGATGGACAGATTTTTCAAAAGCTACCTAAAACTTGTTGACACAGATGCCACACTGTTCTTTCATTCTAATGCTGCCACAGAATGGTTAATTTTAAGGATTGAAGCCTTACAGAACTTGACACTCTTCACTGCAGCTTTGTTGCTTATTTTACTTCCAAAGGGATATGTGGCCCCTGGTCTTGTCGGAGTTTCGCTATCTTATGCATTTTCATTGACAGCCACCCAAGTTTTTCTGACCAAGTGCTTCTGCAACTTATCAAACTATTTGATCTCTCTTGAAAGAATCAAGCAATTTATTAACATACCATCTGAGCCTAGTGCAATTGTGGAGGACTTGAGGCCACCATCTTCTTGGCCGTCGAGGGGTCGGATTGATCTCCAATCTTTGGAGATTAGATATCGTCCAAATGCTCCATTAGTCCTTAAGGGCATATCTTGTACATTTAAAGAAGGGAGTAGAGTGGGAGTGGTAGGAAGAACCGGAAGTGGAAAAACTACACTTATAAGTGCTTTATTCCGCTTAGTTGAGCCTGCAGGAGGTGATATTCTTATAGATGGGATCAACATATGCTCAATAGGGCTGAAAGATTTGAGAATGAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAAGGGCAGCATTAGAACAAACTTGGACCCTTTAGGTCTCTACACTGATCATGAAATATGGAAGGCTCTAGAGAAATGTCAGCTTAAGGAAACAATTAGTTGTCTACCAAATCTCTTGGACTCTTCTGGGCAGCGCCAACTGTTTTGTCTAGGAAGAGTACTTCTTAAGAGGAACAGAATTCTTGTGCTGGATGAAGCTACTGCCTCCATTGATTCCACCACCGATGCCATTTTACAACGAGTTATCAGAGAAGAATTCTCAGAATGCACAGTTATAACGGTGGCTCACAGAGTTCCAACTGTAATAGATAGTGACATGGTCATGGTCCTGTCTTATGGGAAACTGATTGAATATGATGAGCCTTCAAAGCTTATGGAGAGAGATTCTTCATTCTATAAGCTGGTGTCAGAATATTGGTCCAACTGTAATAGGAATATTCTCCAAAAAGACTAG 4365 0.3906 MSFHSLIFFIFIFFSGTCLGNFSWTSISTQRTIIDTTNLIFLCIFYISLFINLIMRIPSGSSRKGWLHLVTSLCCAFLSTTCLINCLWSLIAKSNGSNQLSLIYFIRSLVWISLTVSFLVQKSQWTKILTTIWWVCSCALVSALNIEILVREQKLEIYDMMIWPVHILLVIYDFHNHGYFVQQQVSDSSLSDPLLAHKVEHNQETELGHGNILNRMTFSWINLLLKLGYSKPLTLEDIPSLASEDEAEIGYQKFAHELDSLLRERSKNDSTNLVLWLIARVYFKENIFIAICAVLRTICAVASPLLVYSFVKYSNSIEQDLKWGLTIVTCLVLAKVVESMSQRHWFFNSRRSGMKMRSTLMAAVYQKQLKLSVWGRRRHSTGEIVNYIAVDAYRMGEFPWWFHIAWSSALQVFLAVCVLFGVVGLGALPGLVPLLICGIINVPFAKILQRCRSEFMVIQDERLRSTSEILSSMKIIKLQSWEEKFKKLVESLRAREFKCLTKAQLMRAFGAFIYWMSPTIISSVIFMGCVLFQSAPLNAETIFTILAVLKSMGEPVNLIPEALSVLIQVKVSFDRLNAFLLDDEIKVDDGRRNATLSSCNSVEIIAGNFSWNEESLHPTLRDVKLDIKWGQKIAVCGPVGAGKTALLYAILGEIPKVSGTVSVGGTFAYVSQIPWIQSGTIRDNILYGKPMEKTRYEYSIKVCALDKDIDGFSHGDLTEIGQRGINMSGGQKQRIQLARAVYSDADIYLLDDPFSAVDAHTASILFNDCVKTALRSKTVILVTHQVEFLSEVDQILVMERGEITQSGSYKDLLIAGTAFEQLLNAHRDAITGMKKRNEKERVLENKVAVHQEDSHGLNLANRGSEADISSKVQLTQEEEKEIGDIGWKTFCDYILFPKGSWLLCCCILEQFSFVGLQAASTFWLALAIEIPKVTSSILIGVYAVISFLSVVFSYLRSLFGARLGLKASKAFFSAFNDAIFGAPMLFFDSTPVGRILTRASSDFSILDFDMAFATFFVIGEIIELSTMIGIMVSVTWQVLIVAILALAASKYLQGYYQVSARELMRINGTTKAPLMNFTAETSLGVITIRATKMMDRFFKSYLKLVDTDATLFFHSNAATEWLILRIEALQNLTLFTAALLLILLPKGYVAPGLVGVSLSYAFSLTATQVFLTKCFCNLSNYLISLERIKQFINIPSEPSAIVEDLRPPSSWPSRGRIDLQSLEIRYRPNAPLVLKGISCTFKEGSRVGVVGRTGSGKTTLISALFRLVEPAGGDILIDGINICSIGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYTDHEIWKALEKCQLKETISCLPNLLDSSGQRQLFCLGRVLLKRNRILVLDEATASIDSTTDAILQRVIREEFSECTVITVAHRVPTVIDSDMVMVLSYGKLIEYDEPSKLMERDSSFYKLVSEYWSNCNRNILQKD* 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0537 1454 Pfam ABC transporter 1234 1372 IPR003439 GO:0005524
Ahy19g0537 1454 Gene3D - 1200 1441 IPR027417 -
Ahy19g0537 1454 SMART AAA_5 629 802 IPR003593 -
Ahy19g0537 1454 SMART AAA_5 1243 1426 IPR003593 -
Ahy19g0537 1454 CDD ABCC_MRP_domain1 602 802 - -
Ahy19g0537 1454 CDD ABC_6TM_ABCC_D2 899 1192 IPR044726 GO:0140359
Ahy19g0537 1454 Pfam ABC transporter transmembrane region 287 548 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g0537 1454 Pfam ABC transporter transmembrane region 935 1162 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g0537 1454 Gene3D ABC transporter type 1, transmembrane domain 866 1198 IPR036640 GO:0005524|GO:0016021
Ahy19g0537 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1219 1441 IPR003439 GO:0005524
Ahy19g0537 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1210 1440 IPR027417 -
Ahy19g0537 1454 SUPERFAMILY ABC transporter transmembrane region 275 582 IPR036640 GO:0005524|GO:0016021
Ahy19g0537 1454 Gene3D ABC transporter type 1, transmembrane domain 275 576 IPR036640 GO:0005524|GO:0016021
Ahy19g0537 1454 CDD ABCC_MRP_domain2 1215 1425 - -
Ahy19g0537 1454 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 914 1180 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g0537 1454 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 67 1443 - -
Ahy19g0537 1454 Gene3D - 577 851 IPR027417 -
Ahy19g0537 1454 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 604 825 IPR003439 GO:0005524
Ahy19g0537 1454 ProSitePatterns ABC transporters family signature. 727 741 IPR017871 GO:0005524
Ahy19g0537 1454 SUPERFAMILY ABC transporter transmembrane region 907 1197 IPR036640 GO:0005524|GO:0016021
Ahy19g0537 1454 Pfam ABC transporter 620 754 IPR003439 GO:0005524
Ahy19g0537 1454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 602 824 IPR027417 -
Ahy19g0537 1454 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 287 568 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g0537 1454 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 67 1443 - -
Ahy19g0537 1454 CDD ABC_6TM_ABCC_D1 288 576 IPR044746 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0537 Ahy-Chr19 6797601 6803404 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0537 617 848 Calmodulin-binding Proteins AT2G36910 26.744 3.20e-21 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0537 - - gmx:100813711 2149.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0537 19 6797601 6803404 Ahy19g0537 19 6797601 6803404 ECH