Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0536 ATGGCATGCTTTGGAATCACAAGAGATGACTTCTCAGGAACATGTCTTGGAAATTTCAATTGGACTTCAATTTCCACTCAAGGGACTATAATAGACACAACCAACCTAATTTTTCTATGTATTTTCTATATATCTTTGCTCATAAATTTGATAATGAGAATCCCTTGTGGTAGCTCAAGAAAGGGGTGGCTTCATTTAGTTACTTCATTCTGTTGTGCTTTTTTGAGCATTACCTGTTTGGTTAATGGCTTCTGGAATCTCATAGCCAAATCTAATGGTTCCAATCAGCTGAGTTTGATTTACTTTATAAGATCACTGGTTTGGATTTCCTTAACTGTTTCTTTGCTTGTTCAGAAATCCCAGTGGACTAAAATTTTAACCACTATTTGGTGGGTGTGTTCATGTGCATTGGTCTCAACACTAAACATTGAAATTCTAGTTAGAGAGCAAAAGCTTGAGATTTATGACATGATGATATGGCCAGTACATATTCTACTTGTAATCTATAATTTCCATAACCATGGCTATTTTGTTCAACAAAAAGCCTCAGATTCTAGTTTATCTGATCCTCTACTAGCTCATAAGGTTGAGCATAATCAAGAAACAGAGTTAGGCCATGACAACATTCTCAATAGAATGACATTCTCTTGGATCAATTTGTTACTGAAATTGGGTTACTCAAAGCCACTAACACTTGAAGACATCCCTTCCCTTGCTTCTGAAGATGAAGCTGAGATTGGTTATCAAAAGTTTGCTCATGAATTGGACTCCCTTTTGAGGGAGAGGAGCAAGAATGATTCTACAAACTTGGTTCTTTGGTCGATTGTGCGAGTTTACTTTAAAGAAAACATATTTATAGCCATTTGTGCTGTTCTCAGGACAGTTTGTGCTGTGGCTTCTCCCTTACTTGTCTATTCCTTTGTGAAATATTCCAATTCCATTGAGCAAGACTTGAAATGGGGACTAACCATAGTGGCATGTCTAGTACTCGCCAAGGTGGTTGAGTCTATGTCTCAGAGGCATTGGTTTTTCAACTCAAGGAGGTCAGGGATGAAAATGAGATCAACTTTAATGGCAGCAGTATATCAGAAGCAGTTAAAGCTTTCTGTTTGGGGTAGGAGAAGGCATTCAACTGGTGAGATAGTGAATTATATTGTGGTTGATGCATATCGAATGGGAGAATTTCCATGGTGGTTTCATATAGCCTGGAGTTCTGCATTGCAAGTTTTTCTGGCTGTTTGTGTTCTTTTTGGTGTTGTTGGTCTTGGTGCACTTCCTGGTTTAGTCCCTCTTCTCATTTGTGGAATCATCAATGTTCCATTTGCAAAGATCCTACAAAGATGTCGTTCTGAGTTTATGGTTGCACAGGATGAGCGTCTGAGATCAACTTCAGAGATTCTAAGTAGCATGAAAATCATAAAGTTACAATCATGGGAGGAAAAGTTCAAGAAACTAGTCGAATCGCTTCGCGCTAGAGAGTTCAAATGCTTGACTAAGGCACAGTTAATGAGAGCTTTTGGGGCATTCATTTATTGGATGTCTCCTACCATAATCTCTTCTGTTATCTTCACGGGGTGTGTTCTTTTCCAAAGTGCACCTTTGAATGCTGAAACCATCTTCACAATTCTTGCAGTATTGAAAAGCATGGGAGAACCTGTTAATCTGATTCCAGAGGCACTATCTGTTCTTATCCAAGTCAAAGTCTCCTTCGATCGCCTCAACGCATTTTTGCTGGATGATGAGATAAAAGTTGATGATGGTAGAAGAAATGCAACACTGAGTTCTTGTAACAGTGTTGAAATTATTGCAGGAAATTTCACCTGGAATGAGGAATCATTGCATCCAACCCTGAGAGATGTGAATCTAGATATAAAATGGGGTCAGAAAATAGCAGTTTGTGGACCAGTTGGAGCTGGAAAAACAGCTCTCTTATATGCAATTCTTGGAGAGATACCAAAAGTTTCAGGAACAGTTAGTGTTGGTGGAACTTTTGCATATGTTTCCCAAATTCCTTGGATCCAAAGTGGTACCATTCGCGATAATATCCTCTATGGAAAGCCTATGGAGAAAACCAGATATGAATATTGCATTAAGGTATGTGCCTTGGATAAGGATATTGATGGATTCAGCCATGGTGATCTCACAGAAATTGGTCAGCGAGGGATCAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTCGCTCGAGCCGTCTATAGTGATGCAGATATCTATCTCCTTGATGACCCTTTTAGTGCTGTAGATGCTCATACTGCTTCCATTCTGTTCAATGATTGTGTGAAGACTGCTTTAAGAAGCAAAACTGTTATTCTAGTGACTCATCAAGTTGAATTTCTCTCAGAAGTTGATCAAATTCTGGTGATGGAGAGAGGAGAAATAACTCAATCAGGAAGTTATAAAGATCTTTTGATTGCTGGAACAGCCTTTGAACAACTATTGAATGCTCACAGAGATGCAATCATAGGGATGAAGAAAAGGAATGAGAAGGAGAGAGTTCTTGAAAATATAGTTGCAGTTCATCAAGAGGATTCACATGGTTTGAATCTCGCAAACCGTGGAAGTGAAGCTGACATTTCCTCCAAAGTTCAACTTACACAAGAGGAAGAAAAGGAGTTTGGTGATATTGGATGGAAGACATTCTGTGATTATATTCTATTCCCCAAGGGATCATGGCTTCTATGCTGTTGCATATTGGCAAAATGCTTATTTATTGGTCTGCAAGCTGCATCAACTTTTTGGCTCGCACTAGCAATTGAGATACCAAAAGTAACAAGTAGCATCTTGATTGGAGTTTATGCTGTGATTTCCTTTTTAAGTGTTGTATTTTCATATCTAAAGTCTTTCTTTGGTGCACATCTTGGTTTGAAAGCTTCTAAGGCTTTCTTCTCTGCTTTCAATGATGCCATCTTCAGTGCTCCTATGTTGTTCCTTGACTCAACACCTGTAGGGAGGATTCTAACCAGAGCTTCATCAGATTTTAGTTTTTTGGATTTCGATATGGCTTTCGCAACCTTCTTTGTAATAGGCGAAATAATTGAACTTTCAACAATGATTGGGATCATGGTTTCAGTCACATGGCAGGTTCTCATTGTTGCCATTCTTGCACTGGCGGCTTCAAAATATCTTCAGGGTTATTATCAAGTTTCTGCAAGGGAACTTATGAGAATCAATGGAACTACAAAAGCTCCTCTTATGAATTTTACAGCTGAGACATCACTTGGTGTGATTACTATAAGGGCTACCAAGATGATGGACAGATTTTTCAAAAGCTACCTAAAACTTGTTGACACAGATGCCACACTGTTCTTTCATTCTAATGCTGCCACAGAATGGTTAATTTTAAGGATTGAAGCCTTACAGAACTTGACACTCTTCACTGCAGCTTTGTTGCTTATTTTACTTCCAAAGGGATATGTGGCCCCTGGTCTTGTCGGAGTTTCGCTATCTTATGCATTTTCATTGACAGCCACCCAAGTTTTTCTGACCAAGTGGTTCTGCAACTTATCAAACTATTTGATCTCTCTTGAAAGAATCAAGCAATTTATTAACATACCATCCGAGCCTAGTGCAATTGTGGAGGACTTAAGGCCACCATCTTCTTGGCCGTCGAGGGGTCGGATTGATCTCCAATCTCTGGAGATTAGATATCGTCCAAATGCTCCATTAGTCCTTAAGGGCATATCTTGTACATTTAAAGAAGGGAGTAGAGTGGGAGTGGTAGGAAGAACTGGAAGTGGAAAAACTACACTTATAAGCGCTTTATTCCGCTTAGTTGAGCCTGCAGGGGGTGATATTCTTATAGATGGGATCAACATATGCTCAATAGGGCTGAAAGATTTGAGAATGAAGCTAAGCATCATTCCTCAAGAACCAACACTTTTCAGGGGCAGCATTAGAACAAACTTGGACCCTTTAGGTCTCTACACTGATCATGAAATATGGAAGGCTCTAGAGAAATGTCAGCTTAAGGAAACAATTAGTTGTCTACCAAATCTCTTGGACTCTTCTGGGCAGCGCCAACTGTTTTGTCTAGGAAGAGTACTTCTTAAGAGGAACAGAATTCTTGTGCTGGATGAAGCTACTGCCTCCATTGATTCCACCACGGACGCCATTTTACAACGAGTTATCAGAGAAGAATTCTCAGAATGCACAGTTATAACGGTGGCTCACAGAGTTCCAACTGTAATAGATAGTGACATGGTCATGGTCCTGTCTTATGGGAAACTGATTGAATATGATGAGCCTTCAAAGCTTATGGAGAGAGCCTCTTCATTCTATAAGCTGGTGTCAGAATATTGGTCCAACTGTAATAGGAATATTCTCCAAAATGACTAA 4356 0.3946 MACFGITRDDFSGTCLGNFNWTSISTQGTIIDTTNLIFLCIFYISLLINLIMRIPCGSSRKGWLHLVTSFCCAFLSITCLVNGFWNLIAKSNGSNQLSLIYFIRSLVWISLTVSLLVQKSQWTKILTTIWWVCSCALVSTLNIEILVREQKLEIYDMMIWPVHILLVIYNFHNHGYFVQQKASDSSLSDPLLAHKVEHNQETELGHDNILNRMTFSWINLLLKLGYSKPLTLEDIPSLASEDEAEIGYQKFAHELDSLLRERSKNDSTNLVLWSIVRVYFKENIFIAICAVLRTVCAVASPLLVYSFVKYSNSIEQDLKWGLTIVACLVLAKVVESMSQRHWFFNSRRSGMKMRSTLMAAVYQKQLKLSVWGRRRHSTGEIVNYIVVDAYRMGEFPWWFHIAWSSALQVFLAVCVLFGVVGLGALPGLVPLLICGIINVPFAKILQRCRSEFMVAQDERLRSTSEILSSMKIIKLQSWEEKFKKLVESLRAREFKCLTKAQLMRAFGAFIYWMSPTIISSVIFTGCVLFQSAPLNAETIFTILAVLKSMGEPVNLIPEALSVLIQVKVSFDRLNAFLLDDEIKVDDGRRNATLSSCNSVEIIAGNFTWNEESLHPTLRDVNLDIKWGQKIAVCGPVGAGKTALLYAILGEIPKVSGTVSVGGTFAYVSQIPWIQSGTIRDNILYGKPMEKTRYEYCIKVCALDKDIDGFSHGDLTEIGQRGINMSGGQKQRIQLARAVYSDADIYLLDDPFSAVDAHTASILFNDCVKTALRSKTVILVTHQVEFLSEVDQILVMERGEITQSGSYKDLLIAGTAFEQLLNAHRDAIIGMKKRNEKERVLENIVAVHQEDSHGLNLANRGSEADISSKVQLTQEEEKEFGDIGWKTFCDYILFPKGSWLLCCCILAKCLFIGLQAASTFWLALAIEIPKVTSSILIGVYAVISFLSVVFSYLKSFFGAHLGLKASKAFFSAFNDAIFSAPMLFLDSTPVGRILTRASSDFSFLDFDMAFATFFVIGEIIELSTMIGIMVSVTWQVLIVAILALAASKYLQGYYQVSARELMRINGTTKAPLMNFTAETSLGVITIRATKMMDRFFKSYLKLVDTDATLFFHSNAATEWLILRIEALQNLTLFTAALLLILLPKGYVAPGLVGVSLSYAFSLTATQVFLTKWFCNLSNYLISLERIKQFINIPSEPSAIVEDLRPPSSWPSRGRIDLQSLEIRYRPNAPLVLKGISCTFKEGSRVGVVGRTGSGKTTLISALFRLVEPAGGDILIDGINICSIGLKDLRMKLSIIPQEPTLFRGSIRTNLDPLGLYTDHEIWKALEKCQLKETISCLPNLLDSSGQRQLFCLGRVLLKRNRILVLDEATASIDSTTDAILQRVIREEFSECTVITVAHRVPTVIDSDMVMVLSYGKLIEYDEPSKLMERASSFYKLVSEYWSNCNRNILQND* 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0536 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 600 821 IPR027417 -
Ahy19g0536 1451 SUPERFAMILY ABC transporter transmembrane region 272 579 IPR036640 GO:0005524|GO:0016021
Ahy19g0536 1451 Pfam ABC transporter 617 751 IPR003439 GO:0005524
Ahy19g0536 1451 Gene3D - 1197 1438 IPR027417 -
Ahy19g0536 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 601 822 IPR003439 GO:0005524
Ahy19g0536 1451 SUPERFAMILY ABC transporter transmembrane region 898 1194 IPR036640 GO:0005524|GO:0016021
Ahy19g0536 1451 CDD ABCC_MRP_domain1 599 799 - -
Ahy19g0536 1451 CDD ABC_6TM_ABCC_D2 896 1189 IPR044726 GO:0140359
Ahy19g0536 1451 ProSitePatterns ABC transporters family signature. 724 738 IPR017871 GO:0005524
Ahy19g0536 1451 Gene3D - 575 846 IPR027417 -
Ahy19g0536 1451 Pfam ABC transporter 1231 1369 IPR003439 GO:0005524
Ahy19g0536 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1207 1437 IPR027417 -
Ahy19g0536 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1216 1438 IPR003439 GO:0005524
Ahy19g0536 1451 SMART AAA_5 626 799 IPR003593 -
Ahy19g0536 1451 SMART AAA_5 1240 1423 IPR003593 -
Ahy19g0536 1451 CDD ABC_6TM_ABCC_D1 285 573 IPR044746 GO:0140359
Ahy19g0536 1451 Pfam ABC transporter transmembrane region 916 1159 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g0536 1451 Pfam ABC transporter transmembrane region 284 545 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g0536 1451 Gene3D ABC transporter type 1, transmembrane domain 864 1195 IPR036640 GO:0005524|GO:0016021
Ahy19g0536 1451 Gene3D ABC transporter type 1, transmembrane domain 262 574 IPR036640 GO:0005524|GO:0016021
Ahy19g0536 1451 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 63 1440 - -
Ahy19g0536 1451 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 63 1440 - -
Ahy19g0536 1451 CDD ABCC_MRP_domain2 1212 1422 - -
Ahy19g0536 1451 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 904 1177 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g0536 1451 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 565 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0536 Ahy-Chr19 6745439 6751553 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0536 599 845 Calmodulin-binding Proteins AT2G36910 25.843 3.25e-20 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0536 - - gmx:100813711 2152.1