Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0524 ATGCTTGGTGAGACCAGTTGCCCAATGAAGGAGGATTTTATCATGGATGATCCACAGCATGCATGCAGTAATTGTACTATTCCAATGGTGTCTGGCAACCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAGGTGCTATGAAGTGGAATTAAAACGTGAAGAGAGAGAAAGACATCCTATTGATCAAAGGGAGAGTCATACCCTTTATCCAATTGAAATCAATGATGTTCCAGTTGATACAAAGGACATAGATGATATTCTCGAGAGTGAATTCTTTAATACTAGAACATTTCATAATCCGACGGCTCCTGCATTTGTGACTACCTGTAATATATGCGATCTTGACATAGAAACTGGCCAAGGGTGGCGTTGTGAAGTTTGCCCCAAGTATGATGTATGTAATGCTTGTTATCAAAAGGATGGAGGCATTGATCATCCCCATAAGTTGACAAATCATCCATCAATGGCAGATTGTGATGCTGAGAACAAAGAATCAAGGCAGCTTCGAGAATTGAAGCTACGGAAAATGCTTGATCTACTTGTGCATGTACCCCGATGTCGTTCTGCACATTGCCAGTATCCAGATTGCCGCAAAATAAAGGAGCTTTTCCGCCATGGGATGCAATGCAAAACACGCGCTGCTGGAGGTTGTGTTCGTTGTAGGAAAATGTGGTATTTGCTTCAACTCCATGCTCATGCTTGCAAGGAGTCGAGGTGCCGTGTGCCACGTTGCAGAGATTTGAAAGAGCATTCAAGGGGATCTCAGCAACAGTCTGATTCACGGCATAGGACTGCTGTAGCGAGGATGATGAGGCAGTGA 831 0.4356 MLGETSCPMKEDFIMDDPQHACSNCTIPMVSGNRWVCNQCKNFQICDRCYEVELKREERERHPIDQRESHTLYPIEINDVPVDTKDIDDILESEFFNTRTFHNPTAPAFVTTCNICDLDIETGQGWRCEVCPKYDVCNACYQKDGGIDHPHKLTNHPSMADCDAENKESRQLRELKLRKMLDLLVHVPRCRSAHCQYPDCRKIKELFRHGMQCKTRAAGGCVRCRKMWYLLQLHAHACKESRCRVPRCRDLKEHSRGSQQQSDSRHRTAVARMMRQ* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0524 276 Gene3D - 106 161 IPR043145 -
Ahy19g0524 276 PANTHER CBP/P300-RELATED 101 276 IPR013178 GO:0004402|GO:0006355|GO:0016573
Ahy19g0524 276 Pfam Zinc finger, ZZ type 21 51 IPR000433 GO:0008270
Ahy19g0524 276 Pfam Zinc finger, ZZ type 110 149 IPR000433 GO:0008270
Ahy19g0524 276 Pfam TAZ zinc finger 178 248 IPR000197 -
Ahy19g0524 276 PANTHER CBP/P300-RELATED 2 99 IPR013178 GO:0004402|GO:0006355|GO:0016573
Ahy19g0524 276 SMART TAZ_2 171 249 IPR000197 -
Ahy19g0524 276 ProSiteProfiles Zinc finger ZZ-type profile. 17 80 IPR000433 GO:0008270
Ahy19g0524 276 SUPERFAMILY TAZ domain 170 253 IPR035898 -
Ahy19g0524 276 PANTHER HISTONE ACETYLTRANSFERASE HAC12 2 99 - -
Ahy19g0524 276 PANTHER HISTONE ACETYLTRANSFERASE HAC12 101 276 - -
Ahy19g0524 276 ProSitePatterns Zinc finger ZZ-type signature. 22 49 IPR000433 GO:0008270
Ahy19g0524 276 Gene3D TAZ domain 165 276 IPR035898 -
Ahy19g0524 276 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1 158 IPR031162 GO:0004402
Ahy19g0524 276 SMART zz_5 107 153 IPR000433 GO:0008270
Ahy19g0524 276 SMART zz_5 16 60 IPR000433 GO:0008270
Ahy19g0524 276 SUPERFAMILY RING/U-box 3 71 - -
Ahy19g0524 276 Gene3D - 16 73 IPR043145 -
Ahy19g0524 276 SUPERFAMILY RING/U-box 96 157 - -
Ahy19g0524 276 ProSiteProfiles Zinc finger ZZ-type profile. 108 166 IPR000433 GO:0008270
Ahy19g0524 276 MobiDBLite consensus disorder prediction 254 276 - -
Ahy19g0524 276 ProSiteProfiles Zinc finger TAZ-type profile. 170 251 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0524 Ahy-Chr19 6404579 6408406 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Ahy19g0524 zf-TAZ 7.90E-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0524 K04498 - aip:107618596 580.482