Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0476 ATGGTCTATAAGAACCCTAATTCTGTGTTGCAGTCGAAGAAGGAGAAGATGACGACTGTTCCAGGGCAATTGGTGTGGGAGATCGTGAAGAAGAACAACTGCTTCTTGGTGAAAGAGTTCGGAAGGGGCACTCAGAGTGTTGAATTCAGCAGAGAGCCTAACAATCTCTACAATCTCAACTCCTTTAAATACTCAGGTTTGGCAAACAAGAAAACTGTTACCATTCAGCCTGCTGGTAAGGATCAGGGTGTGTTGTTGGCTACAACCAAGACCAAGAAGCAGAACAAGCCTTCTGCTCTTCTTCACAAGTCTCTGATGAAGAAGGAGTTCAGTAGGATGGCTAAGGCTGTTCAAAATCAGGTGACAAAAAACCACTACAGGCCTGATCTCACTAATGCAGCTCTTGCAAGGTTGAGTGCCGTCAATAGAAGCATCAGAGTTGCCAAGTCTGGTGTCAAGAAGAGGAACAGACAGGGCTTGAAGATCCGTGGCAGGAAGTGGAAGTGA 507 0.4596 MVYKNPNSVLQSKKEKMTTVPGQLVWEIVKKNNCFLVKEFGRGTQSVEFSREPNNLYNLNSFKYSGLANKKTVTIQPAGKDQGVLLATTKTKKQNKPSALLHKSLMKKEFSRMAKAVQNQVTKNHYRPDLTNAALARLSAVNRSIRVAKSGVKKRNRQGLKIRGRKWK* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0476 168 Gene3D - 22 149 - -
Ahy19g0476 168 Pfam Ribosomal L28e protein family 24 144 IPR029004 -
Ahy19g0476 168 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 17 166 - -
Ahy19g0476 168 PANTHER 60S RIBOSOMAL PROTEIN L28 17 166 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0476 Ahy-Chr19 5752084 5755005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0476 17 159 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 71.329 1.96e-74 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0476 K02903 - gmx:100499963 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0476 19 5752084 5755005 Ahy18g0211 18 1678819 1680365 ECH
Ahy19g0476 19 5752084 5755005 Ahy19g0476 19 5752084 5755005 ECH