Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0444 ATGACCAACAACTTTGATAGGATTCTTGGCAGAGGTGGATTCGGAACAGTTTATCATGGCTTTATTGAAGACATTCAAGTGGCTGTTAAGCTTCTAATGAGAGTACATCACCGAAATCTGACTTCTCTTATTGGTTATTGCAACGAAGAAACCAATATAGGACTCATCTATGAATACATGGCAAATGGAAACTTAGATGAACATCTTTCAGGAGAAAACATTAAGGAAAAGTTCTTGAATTGGGAAAATAGACTTCAAATAGCATTGGATGCAGCCCAAGGATTGGAATATCTGCATAATGGTTGTAAGCCACCTATAATTCACAGAGATGTAAAATGCACAAATATCCTATTAGATGAAAACTTGCATGCCAAACTTGCTGATTTTGGATTATCCAAATGCTTTGCTGTTGACGGTGATACACATGTGTCGACAATTGTGGCTGGAACTCCAGGCTACCTAGATCCTGAGTACACGACATCAAATAGATTGACAGAAAAAAGTGATGTGTATAGTTTTGGAGTAGTTCTTTTAAGGATAATCACAGGTCAAGCAGTGGTAATAGTAAGAGAAGACATGATTCATCATATAAGTCAACGGATTAATTCCATGGTTGCTGAAGGAGATATAACAAAAGTTGTTGACTCAAGGTTACAAGGAGATTTTGACAGTAACTCTGCATGGAGAGCGGTTGAAATAGCAATGGCCTCTGTGTCTTCCATTTCGGTGGAAAGACCGTACATGAGTGATATAGTGAAAGAGCTGAAGGAGTGTTTGGCTGCAGAATTAGCTCGAAAATATAGTAATTGTGACCTTCAAAATAAAGATTTAGTTGGACAGGTCAGTTTAAACTTGATTAGTACTTATATCAGTCCCATAGCTAGGTAG 888 0.3773 MTNNFDRILGRGGFGTVYHGFIEDIQVAVKLLMRVHHRNLTSLIGYCNEETNIGLIYEYMANGNLDEHLSGENIKEKFLNWENRLQIALDAAQGLEYLHNGCKPPIIHRDVKCTNILLDENLHAKLADFGLSKCFAVDGDTHVSTIVAGTPGYLDPEYTTSNRLTEKSDVYSFGVVLLRIITGQAVVIVREDMIHHISQRINSMVAEGDITKVVDSRLQGDFDSNSAWRAVEIAMASVSSISVERPYMSDIVKELKECLAAELARKYSNCDLQNKDLVGQVSLNLISTYISPIAR* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0444 295 Gene3D Phosphorylase Kinase; domain 1 30 60 - -
Ahy19g0444 295 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 1 269 - -
Ahy19g0444 295 ProSiteProfiles Protein kinase domain profile. 3 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0444 295 Pfam Protein tyrosine and serine/threonine kinase 29 253 IPR001245 GO:0004672|GO:0006468
Ahy19g0444 295 SUPERFAMILY Protein kinase-like (PK-like) 5 255 IPR011009 -
Ahy19g0444 295 ProSitePatterns Protein kinases ATP-binding region signature. 9 30 IPR017441 GO:0005524
Ahy19g0444 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 106 118 IPR008271 GO:0004672|GO:0006468
Ahy19g0444 295 Gene3D Phosphorylase Kinase; domain 1 1 29 - -
Ahy19g0444 295 Gene3D Transferase(Phosphotransferase) domain 1 61 279 - -
Ahy19g0444 295 SMART serkin_6 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0444 295 PANTHER OS07G0107800 PROTEIN-RELATED 1 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0444 Ahy-Chr19 5392396 5395122 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0444 1 295 Receptor kinase-like Gene Family AT1G51820 54.603 1.30e-113 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Ahy19g0444 PK_Tyr_Ser-Thr 1.30E-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0444 - - ahf:112777119 591.267