Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0428 ATGTACTCTGAAAATCTGATAGTGTCCGCTGAAAACCCTAGACCCTTCGCGTTTCAGCAACATCTGTCTTCTTCTTCGTCTACTACTAATTCGGCCAACGCGAAACCCATGAGCAATGAGATCGCACAGATGCCTCCCCCTTCCACTCTCGGTTGCAGGTTCAATGCTATGCTCAAGCTGCGCGACGACGAGCTCAGGGCCACCGCCGCTCACGTGCCCCCTCCGTCTACGGAAGAAATCGTTCAGCTGTACGAGATGCTGCTGTCAGAGCTCACGTCCAATCAGAAGCTCATTATCAACGATCTCACCTTCATCGCTGTGCACCAGAGGGAGCATGCCAGGGGCATCGCCGACGCTATCTGCGCTCGGATTCTCAAGGTGCCTGCAGAGCAAAAGCTTCCTTCACTCTATCTCTTGGACAGTATAGTGAAGAACTTTGGAGAGGAATATGTTGGATACTTTGCATTACGCCTGCCCGAAGTTTTCTGTGAGGCATACAGGCAGGTTCAGCCTTATTTGCACCCTGCTATGCGCCATCTCTTTGGCACCTGGTCAGAAGTCTTTCCACCGTCTGCCTTACGCAAGATTGAAGCTGAGTTGCAACTTTCTCAAGTAGTTAATAATAGTCAATCGTCCAACATGAATCCCCTCAGAGCATCTGAATCTCCTAGTCCAAGTCATGGCATACATGTAAATCCAAAGTACCTGCAGCAGTTGGAGCGCTCAACTGTGGATAGTACAAGTGGGAAAAAATGGTGTGGCTTATTCGTCGGGGATGATTGTGTGCAAGAGGAGCTGCTTGAAAAAGCTGTTCCAGGAGATGATGATGGTGAAAGGAAAATGAACTTTGCATGGCGGGTGGACAAGATGGAAGCAGACATTAGAAATCTGAAATTCATGACTCAAGTTCTTGGGTTTGGGTTGTTGGTAGTTGTAGTTTTTGTAGGAATGGTGCTCTTAAAGCGTTGA 969 0.485 MYSENLIVSAENPRPFAFQQHLSSSSSTTNSANAKPMSNEIAQMPPPSTLGCRFNAMLKLRDDELRATAAHVPPPSTEEIVQLYEMLLSELTSNQKLIINDLTFIAVHQREHARGIADAICARILKVPAEQKLPSLYLLDSIVKNFGEEYVGYFALRLPEVFCEAYRQVQPYLHPAMRHLFGTWSEVFPPSALRKIEAELQLSQVVNNSQSSNMNPLRASESPSPSHGIHVNPKYLQQLERSTVDSTSGKKWCGLFVGDDCVQEELLEKAVPGDDDGERKMNFAWRVDKMEADIRNLKFMTQVLGFGLLVVVVFVGMVLLKR* 323
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0428 322 MobiDBLite consensus disorder prediction 20 46 - -
Ahy19g0428 322 SUPERFAMILY ENTH/VHS domain 75 200 IPR008942 -
Ahy19g0428 322 CDD CID_Pcf11 81 200 - -
Ahy19g0428 322 ProSiteProfiles CID domain profile. 76 204 IPR006569 -
Ahy19g0428 322 Gene3D - 73 203 IPR008942 -
Ahy19g0428 322 SMART 558neu5 79 201 IPR006569 -
Ahy19g0428 322 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 48 246 - -
Ahy19g0428 322 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 48 246 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Ahy19g0428 322 Pfam CID domain 86 194 IPR006569 -
Ahy19g0428 322 MobiDBLite consensus disorder prediction 20 45 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy19g0428 Ahy-Chr19 5067266 5069906 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0428 28 247 C2H2 Transcription Factor Family AT4G04885 58.824 3.54e-73 239