Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0400 ATGCTGGGAGGGGCTGGGTTTAGCACTGCTGGGAGGGGTTGGGAGGGTAATTTGACAGGAAACAACCTTTCGGGTTTAATTCCTAAGGCTCTCCGAAAGAAGGTTGCAGATGCAAGTTTGCAATTAAGTGTTGGTGGTAATCCAAATCTCTGCGTAAAGGATTCATGCAACAATAAGAAGTTTGTTACACCACTCATGGCATCTCTTGCAGCAGCTTTAATTTTAATCCTTTTGATCGCTGGATTTTGGATATTTCAAAGAAGACGAAAACAAAAAGAAGCACATATTATTAAAGAGGGAGCATCGTTGAAATTAAAACAAGCAGCATTCACTTACAATGAGATTCTCTCTATCACTGATAACTTCAAAACAATGATTGGAGAAGGAGGATTTGGAAAAGTTTATTTTGGCATTTTACCGGATCATACTCAAGTTGCTATCAAGTTGCTTTCTCCATCATCACGGCAAGGTTATACGGAGTTTCAATCAGAGGTACATCTTCATAGCCTTATACGTCATAGGAACTTAGTCTCTCTCGTTGGGTATTGTGATGAAGGAGAGAATAAAGCATTGATTTATGAATATATGTCCAATGGCAATCTCCGGCAACATTTGTCAAGGGAAAACCCATATGTGTTGAATTGGAATGAGAGACTCAACATAGCAATTGATGCAGTGAATGGACTAAATTATTTGCATAATGGTTGCAATCCATCAATCGTACATAGAGATTTGAAGACTTCAAATATATTGCTAGATCAGTGGAAGCATGCTAAGATAGCTGATTTTGGTCTAAGTAGAGCTTTTCGTAATGATATTGATTCTCACATATCAACTTGTCCTGCTGGTACCCCAGGTTATATTGATCCGGAGTTTCAAAGGGTTGGATGTTTGAATAAGAAAAGCGATATTTACAGCACTGGCATCATTCTGCTTGAGTTGATAAGCGGCCGACCTGCAATATCAAGAGAAGCCAAAGGAGAAGCCATTCACATACTTGAATGGGTTAGGCCCATATTTGAAAGAGGTGATGATGATGACATTCAAAACATTGTTGATTCAAGGTTGTTGCAAGGAGAGTTCAACGTTGATTCCGCAAGAAAAGTTGTACAGATTGCAGTGTCTTGCGCTTCACCAACTGCAGCTGAAAGACCAGACATAAATCAAGTCCTTGTAGAGCTGAAGGAATGCTTATCTTTTGATACGCCTGAGGTGTCCGTACACATTGAAACTGACTGTTCTTTGATCTCCGGTAGATAG 1260 0.3968 MLGGAGFSTAGRGWEGNLTGNNLSGLIPKALRKKVADASLQLSVGGNPNLCVKDSCNNKKFVTPLMASLAAALILILLIAGFWIFQRRRKQKEAHIIKEGASLKLKQAAFTYNEILSITDNFKTMIGEGGFGKVYFGILPDHTQVAIKLLSPSSRQGYTEFQSEVHLHSLIRHRNLVSLVGYCDEGENKALIYEYMSNGNLRQHLSRENPYVLNWNERLNIAIDAVNGLNYLHNGCNPSIVHRDLKTSNILLDQWKHAKIADFGLSRAFRNDIDSHISTCPAGTPGYIDPEFQRVGCLNKKSDIYSTGIILLELISGRPAISREAKGEAIHILEWVRPIFERGDDDDIQNIVDSRLLQGEFNVDSARKVVQIAVSCASPTAAERPDINQVLVELKECLSFDTPEVSVHIETDCSLISGR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0400 419 PANTHER OS07G0107800 PROTEIN-RELATED 17 404 - -
Ahy19g0400 419 Gene3D Phosphorylase Kinase; domain 1 83 195 - -
Ahy19g0400 419 Gene3D Transferase(Phosphotransferase) domain 1 196 411 - -
Ahy19g0400 419 ProSiteProfiles Protein kinase domain profile. 120 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0400 419 ProSitePatterns Protein kinases ATP-binding region signature. 126 148 IPR017441 GO:0005524
Ahy19g0400 419 Pfam Protein kinase domain 123 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0400 419 SUPERFAMILY Protein kinase-like (PK-like) 107 394 IPR011009 -
Ahy19g0400 419 SMART serkin_6 120 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0400 419 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 17 404 - -
Ahy19g0400 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0400 Ahy-Chr19 4786564 4792680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0400 17 399 Receptor kinase-like Gene Family AT1G51830 45.161 3.43e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Ahy19g0400 Pkinase 1.10E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0400 - - ahf:112777739 827.009