Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0390 ATGGGAAAAGCTACAAGGTGGTTGAAGGGTCTATTAGGAATGAAAAAGGAGAATAAAGAGAATAGTAATAAGGATCAACACCACATTGAAAATTCAGGGTCATTGGCAACAATAACATCTTCTTTTTCTTCTTCTTATGACAAGAAAGAGAAGAAAAGATGGAGTTTTGCTAAGCAAGTAGAGAAGGATAATAATAATAATAATAGAAACATTGTTGCTCCTTCCAATGGTGCAGCTTTGGATTCTTCTTCTGATGGTGCTTGGATTAGATCCTATATTGCTGACACTGAGAGTGAGCAGAACAAGCATGCAATTGCTGTGGCAGCTGCCACTGCCGCGGCTGCAGATGCCGCCGTGGCAGCTGCGCAGGCGGCGGTGGCAGTTGTTAGGCTGACAAGCCAAGGGAGAGGCACATTGTTCAGTGGCAGCAGAGACAAGTGGGCTGCTGTAAAAATCCAAACTTTCTTCAGAGGCTATTTGGCAAGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGTTTTCTAGTTAGAAAGAGGGCTGCCGCAACTCTTCACAGTATGCAGGCTCTAATTCGAGCTCAGGCCGCCGTCCGGTCGCAGCGCGCCCGCCGTTCCATGAGCAAAGACAATAGGTTCCTCCCGGAAGTTCTTGCAAGAAAATCTCTGGAACGATTTGATGAAACAAGGAGTGAATTCCACAGCAAAAGGATGATGATACCTACATCTTATGAAGCATCATTGAATGGATTTGATGAGTCTCCAAAAATTGTTGAAATTGACACTTACAAGACTAGATCATCAAGGTCAAGGCGTTACACCTCTACAATGTCCGAATGTGGCGAAGATCCGCCATACCACGCTGTCTCATCCCCTCTTCCTGGCCGAATCTCGGTCCCAGATTGCCGGCACCTTCAAGATTTCGATTGGTACTTGAGTGCCGACGAATGTAGGTATTCGACGGCACACAACACTCCAAGATTCGCAAACTACGCGCACCCTAAAATTGCCCCGGCCACACCGGCTAAAAGTGTGTGTGGAGGGGACACATTTTTTAGGCCTTATTCCAATTATCCAAATTACATGTCAAATACTCAATCTTTTAATGCAAAATTAAGGTGTCATAGTGCTCCAAAGCAAAGGCCTGAGCCAAAGAAGAGGCTTTCACTCAATGAAATGATGGCAGCAAGGAACAGCATAAGTGGTGTTAGAATGCATAGGCCATCCAATTTTCAAGGTCAAGAATCATGGAATTTTTGA 1278 0.4484 MGKATRWLKGLLGMKKENKENSNKDQHHIENSGSLATITSSFSSSYDKKEKKRWSFAKQVEKDNNNNNRNIVAPSNGAALDSSSDGAWIRSYIADTESEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLFSGSRDKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGFLVRKRAAATLHSMQALIRAQAAVRSQRARRSMSKDNRFLPEVLARKSLERFDETRSEFHSKRMMIPTSYEASLNGFDESPKIVEIDTYKTRSSRSRRYTSTMSECGEDPPYHAVSSPLPGRISVPDCRHLQDFDWYLSADECRYSTAHNTPRFANYAHPKIAPATPAKSVCGGDTFFRPYSNYPNYMSNTQSFNAKLRCHSAPKQRPEPKKRLSLNEMMAARNSISGVRMHRPSNFQGQESWNF* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0390 425 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 415 - -
Ahy19g0390 425 ProSiteProfiles IQ motif profile. 169 196 IPR000048 GO:0005515
Ahy19g0390 425 MobiDBLite consensus disorder prediction 9 34 - -
Ahy19g0390 425 MobiDBLite consensus disorder prediction 10 27 - -
Ahy19g0390 425 SMART iq_5 167 188 IPR000048 GO:0005515
Ahy19g0390 425 SMART iq_5 144 166 IPR000048 GO:0005515
Ahy19g0390 425 Pfam IQ calmodulin-binding motif 172 186 IPR000048 GO:0005515
Ahy19g0390 425 Pfam IQ calmodulin-binding motif 147 166 IPR000048 GO:0005515
Ahy19g0390 425 PANTHER IQ-DOMAIN 5-RELATED 1 415 - -
Ahy19g0390 425 Gene3D - 87 170 - -
Ahy19g0390 425 ProSiteProfiles IQ motif profile. 145 173 IPR000048 GO:0005515
Ahy19g0390 425 Pfam Protein of unknown function (DUF4005) 326 408 IPR025064 -
Ahy19g0390 425 ProSiteProfiles IQ motif profile. 193 222 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0390 Ahy-Chr19 4612558 4616056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0390 1 411 IQD Protein Family AT3G16490 51.765 3.09e-104 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0390 - - adu:107463958 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0390 19 4612558 4616056 Ahy19g0390 19 4612558 4616056 ECH