Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0383 ATGGTTCTTGTACGGATACCCCATTTGAGGTTCTTTCTGTTTCTGCTTCTTCATATTCACTGCATCAGCTGCTACAACACCACAACAACACCATTGGGCTGTACGGACACAGGCCGTGTCTGCACCTCTTTCTTGGCCTTTAAGCCTCAGAACCAAAGCTTAGCTGTGATTCAAAGCATGTTTGATGTGTTACCCGGTGACATCACTGTTGAGGATAGTGGTTGGGACTATGTGTTCATAAGGAAGAACTGTTCTTGTGCCTATGGCCTCAGGAAGTATGTGTCTAACACCACTTTTACTGTGAAATCCAATCAAGGGTATGTGTATGATTTGGTTATGGATGCTTATGATGGTCTTGCTTTGCCTCCAAACACAACAAGGAGGGCTAAGAATGGTGCTGTTGTGTCTTTGAGGTTGTTCTGTGGCTGCTCTAGTGGCTTGTGGAACTATCTGATGAGTTATGTTATGAGAGATGGTGACAGTGTTGAATCATTGGCAAGTAGATTTGGGGTTAGTATGGATAACATTGAGAGTGTGAATGGCATTGGTAATCCTGATAATGTCACGGTTGGTTCGGTTTATTATATACCTCTTGATTCAGCTCCAGGTGATCCCTATCCCATTAACAATACTGCTCCTCCAGCTCCTGTTCCCGCCCCATCTGTTGAGAATATCTCAGGTGATCAAGTCGGTCGTAAGGCTCATGTACCTTACGGATGGATCATTGGGGGTTCAGGGGTTGGTCTTTTTATGGTGTTATTAGGCATAGTTCTCTGTGTTTCTCTGAAGTCATCAAATTGTCGCTCTGAAGCCAGAAGTAATGAAAAAGATGCTGAGGGGAAGATATCTCATAAGTTCCATATTCTTAGAAATCCAAGTTTTTTCTGTGGTTCTGGGAGGTATATATGTGGCAAAACTGTAGAACAGAAGCAAACTGATGCCGAATCCAGTAATCACACGATTACCGTTCCCAAAGTTTCAACTCTTGGCCCTGATGTGTTTGACATGGATAAGCCTGTAGTTTTTACATATGAAGAGATTTTCGCCACAACTGATTGTTTCTCTGATTCAAATCTGCTTGGTCATGGAACCTATGGTTCTGTTTACTATAGCCTTCTTCGGGATCAGGAAGTTGCTATCAAAAGAATGACTGCTATGAAAACAAAAGAATTCATGTCAGAGATGAAAGTTCTATGCAAGGTCCATCATGCTAATCTGGTAGAATTGATCGGCTATGCGGCTAGTCAGGATGAGCTTTTCCTTGTTTATGAATATGCTCAAAAGGGTTCACTTAGAAGTCATTTGCATGATCCTCAAAATAAGGGTCATTCCCCACTTTCTTGGATCATGAGGGTCCAAATTGCTCTTGATGCCGCTCGGGGACTTGAATACATACATGAACACACTAAGACTCATTATGTCCACCGGGACATCAAGACGAGCAACATTTTGCTCGATGCTTCCTTTAGAGCAAAGATTTCGGATTTCGGGTTAGCAAAACTTGTTGGGAAAACAAATGATGGCGAAGTTTCAACAACCAAAGTTGTTGGTACTTATGGATATCTTGCACCAGAATACTTGAGTGATGGCCTTGCAACAACAAAGAGTGATGTCTATGCATTTGGTGTTGTCCTTTTCGAGATCATATCGGGGAGGGAGGCCATTATTCGAACAGAAGGAACGATGTCCAAAAATCCGGATAGGCGTTCATTGGCGTCTGTGATGTTGGCAGTCCTTAGGAACTCGCCGGATTCCGTGAGCATGTCAAACATGAGAGATTATATTGACCCAAATATGATGGATCTGTATCCCCATGATTGTGTATTTAAGATGGCCATGCTGGCGAAGCAATGCGTGGATGACGATCCGGTCTTACGGCCGGACATGAAACAAGTTGTGATATCTCTCTCACAGATTCTTCTTTCTTCAATTGAATGGGAAGCAACTCTGGCAGGGAATAGCCAAGTATTTAGTGGCCTTGTTCAGGGAAGATAG 1995 0.4301 MVLVRIPHLRFFLFLLLHIHCISCYNTTTTPLGCTDTGRVCTSFLAFKPQNQSLAVIQSMFDVLPGDITVEDSGWDYVFIRKNCSCAYGLRKYVSNTTFTVKSNQGYVYDLVMDAYDGLALPPNTTRRAKNGAVVSLRLFCGCSSGLWNYLMSYVMRDGDSVESLASRFGVSMDNIESVNGIGNPDNVTVGSVYYIPLDSAPGDPYPINNTAPPAPVPAPSVENISGDQVGRKAHVPYGWIIGGSGVGLFMVLLGIVLCVSLKSSNCRSEARSNEKDAEGKISHKFHILRNPSFFCGSGRYICGKTVEQKQTDAESSNHTITVPKVSTLGPDVFDMDKPVVFTYEEIFATTDCFSDSNLLGHGTYGSVYYSLLRDQEVAIKRMTAMKTKEFMSEMKVLCKVHHANLVELIGYAASQDELFLVYEYAQKGSLRSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKTNDGEVSTTKVVGTYGYLAPEYLSDGLATTKSDVYAFGVVLFEIISGREAIIRTEGTMSKNPDRRSLASVMLAVLRNSPDSVSMSNMRDYIDPNMMDLYPHDCVFKMAMLAKQCVDDDPVLRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0383 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Ahy19g0383 664 ProSiteProfiles Protein kinase domain profile. 354 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy19g0383 664 ProSitePatterns Protein kinases ATP-binding region signature. 360 387 IPR017441 GO:0005524
Ahy19g0383 664 Gene3D Transferase(Phosphotransferase) domain 1 427 650 - -
Ahy19g0383 664 SMART LysM_2 153 197 IPR018392 -
Ahy19g0383 664 Pfam Protein tyrosine and serine/threonine kinase 358 634 IPR001245 GO:0004672|GO:0006468
Ahy19g0383 664 Gene3D Phosphorylase Kinase; domain 1 330 425 - -
Ahy19g0383 664 CDD LysM 153 196 IPR018392 -
Ahy19g0383 664 SUPERFAMILY Protein kinase-like (PK-like) 332 636 IPR011009 -
Ahy19g0383 664 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 33 664 IPR044812 GO:0019199|GO:0045087
Ahy19g0383 664 SUPERFAMILY LysM domain 152 197 IPR036779 -
Ahy19g0383 664 Gene3D LysM domain 149 204 IPR036779 -
Ahy19g0383 664 PANTHER BNAA06G02020D PROTEIN 33 664 - -
Ahy19g0383 664 ProSiteProfiles LysM domain profile. 152 196 IPR018392 -
Ahy19g0383 664 Pfam LysM domain 154 193 IPR018392 -
Ahy19g0383 664 SMART serkin_6 354 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0383 Ahy-Chr19 4526040 4532174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0383 31 664 Receptor kinase-like Gene Family AT1G51940 69.673 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Ahy19g0383 PK_Tyr_Ser-Thr 2.40E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0383 - - gmx:100796989 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0383 19 4526040 4532174 Ahy19g0383 19 4526040 4532174 ECH