Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0381 ATGTTGCCCGTTTTTTTGGGTTTGGATGGGTTGCGAGCTGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCTAGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCAAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGCGGTACACGTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGCTGTAACCCGATGTGGATGTTTGGCGGAGATGAGGATAAAGAGGAAAGAAGGTAGTGGGAGGTGGTATGTGTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGAGAGATTGGGATTAGCATACCTAAGATTTATGAGTCCTTCGCAGCACAACTAGGGGGTTTTAACCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGACGTAAGTGCAGCTGTTAGGTACTTGGAAGGTCTGGCACGCATGGATGGGAAAATGTTTTGGCGCTACAAGTTGGGATCAGGGCAACACCTATGCAACTTGTTTTGGAGCGATGGTCGTTGTCAGGAAGATTATGCGATATTCGGCGATGTGCTAGCATTCGACGCTACCTATGGCCGCAACAAGTACAACCTACCTGTTGTAGTATTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTCGGAACAGCAATGGTGTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCAATCAGTCATCACGGATGGCGACCCGGCCATGCGTATAGCAATCCGCACCGTTTTTCCTGACGCACATCATCGGTTGTGTGCCTGGCATCTGCTGAGGAACTCGACTGCAAACATAAGCGACCCGAGATTCACACAAATGTTTAGACACTGCATGCTGGCAGATATGGAAATCGAAGAGTTCGAAGCGTATTGGGAGTCAATGGTCAATGAGTGCGGTGTCAGGGAGGTTGAGTGGGTTAAGGACTTGTACACCAAAAAGCACGCTTGGGCAACCGCATACATTCGTGGTAGATTTTTTGCTGGAATACGGACAACCTCTAGGTGCGAGTCACTACACGCCAAACTAGGGAGGTTTGTTGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGATTTTCTGCGTGACACCGAGGATGAGCTAGACTTTCGTTCATGGTACGGAACACCTGTGCTACAAACGGAGTTCGTTGAGCTGGAAAAGTCTGGATGGACTATGTTCACCCGCGAAATGTTTCTCAGATACCGGGATAGCCTGAAACGGTGTGTTCGTGTTAGAATATGTGAATTTGATGATAGTGACAACCCTCATGCATATACTCTTCAGAAGTATCGGAGGCCTGAGATGAATTGGAAGGTTTATAGGGACCATATCTCGAACAGATTTACTTGCAGCTGCATGCGCATGGAGTCGTTTGGCATTCCTTGTGTGCATATCCTTTCCGTTTGTGTAAGGCTAGACTTGGTGGAAATCCCTGAAAGCCTGGTGCTGCGTAGGTGGTCTAAGGCAGCCAAATTGGAGATACATAACCAATGTGGTGAGCAACACATTGTTGAACCAAGTGTGACCTATAGGACACGATTGGGTGCTTTCTCCCAGCTGTGCAAGCGTTTAGGGCGCGTTGCTTGCATGAGCGATGAAGACTTCAAGGTTTACTCAAACAAGCTTATGAGCGATGCTCTGTTCCTTGAAATAAAGTACGGCTTAAGACCATTAACGGATAATATGACAACAGCAAATGACTGCGGGGTGAAGGACCCCATTCGTGTCAGGACAAAAGGCACGGCTCGGATGAGTCAAGCAGGCGGTTCTGCGCCGAAAACGAAAAGAAAGTGCAGCACATGCGGGAAGCTCGGGCACCGGAGGACTAGATGCCCCATCGGAGGCGCGCAACCTTCAACGAGGAACAAAGAATCACTTGCTGGCAGAAATAAACGCAAGCGAACGAAGGTTACCACCTAA 2157 0.4789 MLPVFLGLDGLRAEDVLEMEFSSPQEASGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKAVTRCGCLAEMRIKRKEGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDVSAAVRYLEGLARMDGKMFWRYKLGSGQHLCNLFWSDGRCQEDYAIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIRTVFPDAHHRLCAWHLLRNSTANISDPRFTQMFRHCMLADMEIEEFEAYWESMVNECGVREVEWVKDLYTKKHAWATAYIRGRFFAGIRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFRSWYGTPVLQTEFVELEKSGWTMFTREMFLRYRDSLKRCVRVRICEFDDSDNPHAYTLQKYRRPEMNWKVYRDHISNRFTCSCMRMESFGIPCVHILSVCVRLDLVEIPESLVLRRWSKAAKLEIHNQCGEQHIVEPSVTYRTRLGAFSQLCKRLGRVACMSDEDFKVYSNKLMSDALFLEIKYGLRPLTDNMTTANDCGVKDPIRVRTKGTARMSQAGGSAPKTKRKCSTCGKLGHRRTRCPIGGAQPSTRNKESLAGRNKRKRTKVTT* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0381 718 SMART 26again6 527 554 IPR006564 GO:0008270
Ahy19g0381 718 ProSiteProfiles Zinc finger CCHC-type profile. 675 691 IPR001878 GO:0003676|GO:0008270
Ahy19g0381 718 Pfam MULE transposase domain 239 333 IPR018289 -
Ahy19g0381 718 Pfam FAR1 DNA-binding domain 30 119 IPR004330 -
Ahy19g0381 718 ProSiteProfiles Zinc finger SWIM-type profile. 519 552 IPR007527 GO:0008270
Ahy19g0381 718 SUPERFAMILY Retrovirus zinc finger-like domains 657 691 IPR036875 GO:0003676|GO:0008270
Ahy19g0381 718 MobiDBLite consensus disorder prediction 658 718 - -
Ahy19g0381 718 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 590 IPR031052 GO:0006355
Ahy19g0381 718 PANTHER OS02G0262500 PROTEIN 15 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0381 Ahy-Chr19 4518209 4520365 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy19g0381 MULE 7.50E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0381 - - aip:107611673 1395.95