Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0360 ATGTCCTTGACCCCTCGAAAAAGTGGAGATATTTACCCCTCCGTTAGAGTCGCTCCGTTTGCCTTGACGGAAAACGGTGACGTGGCTCCCGTGGCGCTGACCTGGCCGTTACGGGCTGCCACTGTGAAGGTGAAGCGGGTGAAGGAAGAAAGGGAGCATTCCGACCCATGGCATCCGACGGAGCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGTGCCCTCAATCATCGCTGCCACCGGAATCGGAACCACTCCCGCCAGCTTCTCCTCCATTTCCGTCTCCGTACGCGGCGGTGCTGGCTCTCCCTCTTCTCCTTCCTCAACCTCCGCAGCGTCTTCGCTCGACCACAAGTCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGCGCATACACACCGATGACGATGCTTCCGCCAAGGACGACGGCGTCTCCATGGGGCCCGCCGTTGGGTCCTTAGTGGGCCCCAGAGCTCCCGCGGGGCTCTGGGCCTTCCCGGTTAAGCCCGATTTTGGTCAAATTTGGAGTTTCACAGTGGCTGCTCCTCCGCCGGAGATGGTTGTGCAGTCGGCGGCGGTGTCGGTGTCTCAGCAGCAGCAAGCTTCTTTGTTCGTTCACTATCAGCATCAGCATCAGCAGCAGCAACAAGCCATGGGAGAAACTTTGGCGACGAGGCTGGGAAATTACCTTCTTGGACATCTGAATTTGCTGGCTTCTAAGTCAGGAGGGCCCGGAAAATCTTAG 765 0.5935 MSLTPRKSGDIYPSVRVAPFALTENGDVAPVALTWPLRAATVKVKRVKEEREHSDPWHPTELGHKSDGQTIEWLLRQAVPSIIAATGIGTTPASFSSISVSVRGGAGSPSSPSSTSAASSLDHKSLLAPTPFILGKRIHTDDDASAKDDGVSMGPAVGSLVGPRAPAGLWAFPVKPDFGQIWSFTVAAPPPEMVVQSAAVSVSQQQQASLFVHYQHQHQQQQQAMGETLATRLGNYLLGHLNLLASKSGGPGKS* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0360 254 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 61 254 IPR005333 GO:0003700
Ahy19g0360 254 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 61 254 - -
Ahy19g0360 254 MobiDBLite consensus disorder prediction 100 121 - -
Ahy19g0360 254 Pfam TCP family transcription factor 61 125 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0360 Ahy-Chr19 4188924 4189800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0360 61 250 TCP Transcription Factor Family AT5G23280 56.995 2.58e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy19g0360 TCP 1.90E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0360 K16221 - cpap:110813909 219.164