Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0334 ATGGATGCAGAAGAAGAACTCGATGCAAACTCATATTCAACAAACAATTCCACAACAAATTTGCAGAATGGACCAGCTTACCTGTATGCCGGAACGCAACCTTTGAATGCCGGTGGTCGTCCGTGGCAGGGAACAAATCCGGTCGAGGACGAAGCAGCAGCAGATCTGACAACAGGTAGCGGCACCGAGGACGGCACCTCCGTGAAGGGGGACGATGGCAACGGGACCTCACTCCTGGTGGCGGTCTTCCCTTGGAATCGAGACGGAGGACAAAGCGGCGAGGGTTTGCAGGGACAAGTGGCGGCTTCGGGAAGAGGCAGGGAGAACTCGAACAGCGAACAGCGAACAGCGGAGGGTCAGGAGTTGGACGGTAGCGGCGGTGCCTCCATGCAAGTGAAGTGGACTGCACCTGAATTTTCACCTTTTCTCCTCAACACAACATTCTTTCTCTTCTCTTCTTCTACTTCCACAATGACACTAACAACTTCATCATCTTCTTCTTCTTCTTCTTCAGAAACATCTACTACCAGCACCATTTCACCACCACCCTCACCCTCACCCTCCTCATCTTCTTCTTCTTCCAAGAAGCAAAAAACAGAGCATGCCAACAAGGACCCCAAGAGACCAAGAGACTGCAGCAAGCACCCCCTCTACCATGGCGTCCGCAAGCGCAATTGGGGCAAATGGGTCTCCGAAATCCGCGAGCCTCGCAAGAAATCCAGGATTTGGCTTGGAACTTTCGCCACGCCCGAGATGGCTGCCAGAGCACACGACGTCGCCGCCTTGTGCATCAAAGGCCAGTCCGCCATCCTCAATTTCCCCGAACTCGCCGGGACACTCCCTCGTCCAGTCACGTGTTCCCCACGTGACATTCAAGCTGCGGCCACAGCCGCAGCCTCCATGGTCAAATTTGACTCTATTGCTGCTGCCGAACAGCCTCAGCTCCACCCAGACACGTCTGATGATGCTGAGACTTGCTCGCAGCAGCAAGAGGCAGAACAATCGCCGTCGTCGGAATCGTCATCATTGTCAATGTCTAGAGAGACGGATTCGTCTGAACTGAGCGAGATAGTTGAGCTTCCGAACATTGAAGATGATGAAGGGTTTGACTCGGTTGAGTCATCAAGGAGCGAGTTCATTTGGTTCGACATGGTCGATAACTGCAATGGTTGGGTGTATGATCCTCCAATGGGGTTAGAGGGTGCTGAATTCTGTGCAAATTTCATTGCTGATAGTAACTCTTTGATACCCATTTGGGATGATTGA 1266 0.5253 MDAEEELDANSYSTNNSTTNLQNGPAYLYAGTQPLNAGGRPWQGTNPVEDEAAADLTTGSGTEDGTSVKGDDGNGTSLLVAVFPWNRDGGQSGEGLQGQVAASGRGRENSNSEQRTAEGQELDGSGGASMQVKWTAPEFSPFLLNTTFFLFSSSTSTMTLTTSSSSSSSSSETSTTSTISPPPSPSPSSSSSSSKKQKTEHANKDPKRPRDCSKHPLYHGVRKRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALCIKGQSAILNFPELAGTLPRPVTCSPRDIQAAATAAASMVKFDSIAAAEQPQLHPDTSDDAETCSQQQEAEQSPSSESSSLSMSRETDSSELSEIVELPNIEDDEGFDSVESSRSEFIWFDMVDNCNGWVYDPPMGLEGAEFCANFIADSNSLIPIWDD* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0334 421 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 165 396 - -
Ahy19g0334 421 MobiDBLite consensus disorder prediction 8 29 - -
Ahy19g0334 421 MobiDBLite consensus disorder prediction 319 351 - -
Ahy19g0334 421 MobiDBLite consensus disorder prediction 313 370 - -
Ahy19g0334 421 MobiDBLite consensus disorder prediction 160 179 - -
Ahy19g0334 421 SUPERFAMILY DNA-binding domain 217 275 IPR016177 GO:0003677
Ahy19g0334 421 MobiDBLite consensus disorder prediction 197 217 - -
Ahy19g0334 421 PRINTS Ethylene responsive element binding protein signature 218 229 IPR001471 GO:0003700|GO:0006355
Ahy19g0334 421 PRINTS Ethylene responsive element binding protein signature 240 256 IPR001471 GO:0003700|GO:0006355
Ahy19g0334 421 MobiDBLite consensus disorder prediction 92 119 - -
Ahy19g0334 421 CDD AP2 216 276 IPR001471 GO:0003700|GO:0006355
Ahy19g0334 421 Gene3D AP2/ERF domain 217 275 IPR036955 GO:0003700|GO:0006355
Ahy19g0334 421 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 165 396 - -
Ahy19g0334 421 ProSiteProfiles AP2/ERF domain profile. 217 274 IPR001471 GO:0003700|GO:0006355
Ahy19g0334 421 Pfam AP2 domain 216 266 IPR001471 GO:0003700|GO:0006355
Ahy19g0334 421 MobiDBLite consensus disorder prediction 59 73 - -
Ahy19g0334 421 MobiDBLite consensus disorder prediction 1 128 - -
Ahy19g0334 421 MobiDBLite consensus disorder prediction 160 217 - -
Ahy19g0334 421 SMART rav1_2 217 280 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0334 Ahy-Chr19 3836829 3841544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0334 188 398 AP2-EREBP Transcription Factor Family AT5G11590 53.081 1.50e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy19g0334 AP2 1.40E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0334 K09286 - ahf:112777714 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0334 19 3836829 3841544 Ahy19g0334 19 3836829 3841544 ECH