Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0303 TTTGTCATGGCATTGTCAAATCCTTTGAAAGGAGAGCGTAAACCAGGCACTGTTGGCAAACCATTTCCTGGTATAGAGGTCAAGATTCTTTCAGATGAGGACAGTGGGAAAGAAGAGACTAAAGTGGGGGAGCTTTGTGTTAAAAGCCCTTCATCTTTTAAAGAATATTGGAAACTTCCGGAGATAACGAAAGAATCATTTACTGAAGATGGATTCTTCAAGACTGGGGATGCAGTTACTACAGATAAAGATGGATACTACATCATTCTAGGACGTACTAATGCTGATATAATCAAGGCTGGTGGCTACAAACTATCTGCCTTAGAAATTGAATCAGTTATACTAGAGCATCAAGCTGTCGCGGAATGCTGCGTTTTGGGCTTACCTGACAAAGATTATGGGGAAGTTGTCGGCGCGATTATTGTACCAGAGGCTGATGTCAAGAGAAAGCGAGATGAAGAATCAAAGCCTGTTCTAAGCCTGGAAGAGTTATCCAGCTGGGCCAAACCTAAAATTGCACCTTACAAGATACCAACAAAACTTTTTGTTTGGGACTCACTCCCTCGCAATGCAATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAAATGCTAGCTTCGGAACAGTAA 627 0.4163 FVMALSNPLKGERKPGTVGKPFPGIEVKILSDEDSGKEETKVGELCVKSPSSFKEYWKLPEITKESFTEDGFFKTGDAVTTDKDGYYIILGRTNADIIKAGGYKLSALEIESVILEHQAVAECCVLGLPDKDYGEVVGAIIVPEADVKRKRDEESKPVLSLEELSSWAKPKIAPYKIPTKLFVWDSLPRNAMGKVNKKELKKMLASEQ* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0303 208 Pfam AMP-binding enzyme C-terminal domain 109 194 IPR025110 -
Ahy19g0303 208 Gene3D - 1 92 IPR042099 -
Ahy19g0303 208 PANTHER MALONATE--COA LIGASE-LIKE 1 207 - -
Ahy19g0303 208 PANTHER ACYL-COA SYNTHETASE 1 207 - -
Ahy19g0303 208 Gene3D - 95 208 IPR045851 -
Ahy19g0303 208 SUPERFAMILY Acetyl-CoA synthetase-like 6 206 - -
Ahy19g0303 208 Pfam AMP-binding enzyme 10 98 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0303 Ahy-Chr19 3527506 3530313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0303 13 207 Monolignol Biosynthesis Gene Families AT1G20480 30.964 5.58e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0303 K18660 - ahf:112778583 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0303 19 3527506 3530313 Ahy19g0303 19 3527506 3530313 ECH