Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0300 ATGGCGGAGGCCTTGCTTGGAATTGTGCTGGATAACTTGATCCCTTTGGTCCAGAGTGAATTTGCAGCCTTTTTTGGAATCAAGGAAAAGGCTGAAGAGCTGTCACGCACTTTAGAACTCATCAAAGCTGTTCTTGATGATGCCGAGCAGAAACAATGGTCTAATCGTCCTCTGAAGGTGTGGCTGCAGCAGCTTAAAGATGCAATGTATGTGCTGGATGATATCCTTGATCAGTTGCCTACTCAATCCTCTCAACTTGGGTGCTTAACTTCTTTGAACCCAAAGAAGGTGATGCATCGTCGTGAACTTGGACAGAAGTTGAATGAGATAATAGGGAGGTTGGATCGAATTGCTCAAGCTAGGACCAACTTTGATCTTAGACAAGGTGTGAGGGAGAGGCCAAGTGAAGTAGTTGAATGGCGCCAAACTAGCTCAACTATCGCCGTTCCTCAAGTGTACGGACGAGATGAAGATAAAGGGAGAGTTGTGGAGTTTCTTCTTAGCCCATCACGAAGCTCCGAGTTCCTTTCCGTCTATCCCATTGTTGGCTTTGGTGGTCTCGGGAAAACAACACTTGTTCAGCTGGTCTACAACGATCCAGAAGTAGGTAACAATTTTGATTTGAAGATTTGGGTGTGTGTTTCTGAGAATTTCACTGTCAAGAGTATTTTGTGTTCCATTGTAGAAGCTATCACAAATGTTAAGTCTGAGGGTATGGCTTTAGATGTAATGGAGAAAAAAGTGAAAGAATTGCTACAAAGTAAAAAGTATTTACTGGTTTTGGATGATGTATGGAAAAGAAGCCAAGAAATGGAATTGGGATTAACCCAAGACAAATGGGATAAATTAAGATCCGTGTTGTCTTGTGGATCTAAAGGCTCCTCCATTTTAGTATCCACTCGTGATAAGCATGTTGCAACAATTATGGGAACATGCCAAGCTCATTATTTGGACCGTCTATCCGATGATGATTGTTGGTCCTTGTTTAAACTGCGCGCATTTGGAGCTGACAGAGAAGAGCGTGCAGAGCTTGTAGCAATAGGGAAGGAGATAGTCAGGAAATGTGGAGGATCACCTCTTGCAGCACTGGCATTAGGAGGTTTGATGCAATCCAGAAGCACGGAAAAGGAATGGGTTGAAGTTCAGAAAAGTGAGATTTGGAGTTTACCAGATGAGAATGATATTATGCGTGTCTTGAGATTAAGCTACTCTTGTTTAGCGCCAACTCTAAAGCAGTGTTTTGCTTTCTGTGCCATATTTCCAAAAGATATGGAAATGGTGAAGCAAGAATTGATTTATCTTTGGATGGGTAATGGATTTATTTCATCCCGGCCAAACTTGGAGGTGGAGGATGTTGGCAACATGGTTTGGAATGAATTATATGGAAAGTCATTCTTCCAAGATGTCAGGGTTGATGACTTTTCTGGCAAGATTTATTTCAAGATGCATGATTTAGTCCATGATCTTGCTCAATCAATTTCAGAGCAAGAGTGTATATGCTTGGAGAAACAAAACCTTAATGATTCTTCAAGAAACCCCCATCATATTGTTTTTCACGACATTGATAAAAGGCAATTCAAGAAGAGATCCGTTGAGAAAGCTGAATCCTTGCGGACATTGTATCAATTGAATTCATATGGATTTCCTTTCAGTTCTAGATTGATTCGAACAAATAATTCTCTTCGGGTTTTGTGCATATATGGTAGAAAGATACCATCTTTTGGGAGTTTAACTTGCTTGAGGTATTTGGAACTTAGTGATTTGAATATAAAGTGCTTGCCTGCTAGTATTTGCAATTTGGGTAGATTGGAAATCTTGAAACTAAGACAATTGTGGAGGCTTCGCTGTCTACCGAAACACTTGACGAGGATGCAAAATCTCCGACATCTTATCATTGATCATTGTGAGTCACTATCTGAAATGTGTCCAAACATTCACAAACTGTGTGAATTGAGAATGCTAAGTGCATACATTGTGAAATCAGAGAAAGGGTATAGTTTGGCAGAATTACGTCATTTGAATCTGGGAGGAAAGCTAAGCATCAAAGGCCTGGGAAATGTCAGCAGTGTATCTGAAGCTGAAGATGCCAATTTGAAGGGTAAACGAGACCTCACAGAATTGAGCTTGTCATGGTTCAGCATTAATAAGACGAAGTCGGTTGTCGGAGAAGAAGAAGTACTTGAAGCGCTTCAACCTCACTCCACACTCAAGCTGTTGACGATAAGTGAGTATGAGGGATTACAATGGCCAACTTGGATGCAAAACAATTCTGCTACCCACAATTTAGTTTCTCTTCGACTTATGGATTGTGGAAAGTGCGGGCATCTTCCTCCAGTGGGAAAACTTCCATTTCTGAAGGAGCTTCTGGTAAGATGCATGGATGAACTGCAGTACATTGAGGAAGATGAAAGTTATGATGGTGTTGAAGCAATGCCATTCCCATCTTTGGAGGAATTGGGTTTGTCCTACTTGCCAAACGTGGAGAGGTTGATGAAACGGGAAACAACACACATGTTCCCCTCTCTTTCTAAACTGTATATCTGTAAATGCCCTAAACTGCAATTGCCGTGTCTTCCACATGTTAAAATACTCGATGTTATGGAATGTAGCAATGAGCAACTGAAGTCAATCTCTAATCTCAACAGTCTTAATGAACTATATCTTAATCTAAATGATGAAGTGTCGTGCTTCCCAGAAGGAATGCTGAACAACATGACCTCTCTTGCAACTCTGGAAATAAAATATTTCAGTGAATTGAAGGAACTGCCATCTGACATCACAAAACTCACTGCTTTGTCTGATCTAACCATCAGTAAATGTGGTAAGCTGGAGTGTTTACCAGAACAGGGTTTGGAAGGCTTATCTTCACTTCGAAAACTGTCAATTCATTACTGTAAGAGTTTGGGATCCTTGCCTCATGGTGTCCGGCACTTAACTTCACTTCAATCTTTGAGTATTCGTGGCTGCCCAATGTTGAAAGAGCGGTGTAAGCAAGGAACAGGGGAGGATTGGCACAAGATAGCACATGTTCCTGATTTAGATATCTAG 3048 0.4111 MAEALLGIVLDNLIPLVQSEFAAFFGIKEKAEELSRTLELIKAVLDDAEQKQWSNRPLKVWLQQLKDAMYVLDDILDQLPTQSSQLGCLTSLNPKKVMHRRELGQKLNEIIGRLDRIAQARTNFDLRQGVRERPSEVVEWRQTSSTIAVPQVYGRDEDKGRVVEFLLSPSRSSEFLSVYPIVGFGGLGKTTLVQLVYNDPEVGNNFDLKIWVCVSENFTVKSILCSIVEAITNVKSEGMALDVMEKKVKELLQSKKYLLVLDDVWKRSQEMELGLTQDKWDKLRSVLSCGSKGSSILVSTRDKHVATIMGTCQAHYLDRLSDDDCWSLFKLRAFGADREERAELVAIGKEIVRKCGGSPLAALALGGLMQSRSTEKEWVEVQKSEIWSLPDENDIMRVLRLSYSCLAPTLKQCFAFCAIFPKDMEMVKQELIYLWMGNGFISSRPNLEVEDVGNMVWNELYGKSFFQDVRVDDFSGKIYFKMHDLVHDLAQSISEQECICLEKQNLNDSSRNPHHIVFHDIDKRQFKKRSVEKAESLRTLYQLNSYGFPFSSRLIRTNNSLRVLCIYGRKIPSFGSLTCLRYLELSDLNIKCLPASICNLGRLEILKLRQLWRLRCLPKHLTRMQNLRHLIIDHCESLSEMCPNIHKLCELRMLSAYIVKSEKGYSLAELRHLNLGGKLSIKGLGNVSSVSEAEDANLKGKRDLTELSLSWFSINKTKSVVGEEEVLEALQPHSTLKLLTISEYEGLQWPTWMQNNSATHNLVSLRLMDCGKCGHLPPVGKLPFLKELLVRCMDELQYIEEDESYDGVEAMPFPSLEELGLSYLPNVERLMKRETTHMFPSLSKLYICKCPKLQLPCLPHVKILDVMECSNEQLKSISNLNSLNELYLNLNDEVSCFPEGMLNNMTSLATLEIKYFSELKELPSDITKLTALSDLTISKCGKLECLPEQGLEGLSSLRKLSIHYCKSLGSLPHGVRHLTSLQSLSIRGCPMLKERCKQGTGEDWHKIAHVPDLDI* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0300 1015 SUPERFAMILY L domain-like 814 993 - -
Ahy19g0300 1015 Gene3D - 403 493 IPR036388 -
Ahy19g0300 1015 SUPERFAMILY L domain-like 481 853 - -
Ahy19g0300 1015 Gene3D Ribonuclease Inhibitor 500 662 IPR032675 -
Ahy19g0300 1015 Gene3D Ribonuclease Inhibitor 859 1000 IPR032675 -
Ahy19g0300 1015 Gene3D Ribonuclease Inhibitor 663 858 IPR032675 -
Ahy19g0300 1015 Gene3D - 139 315 IPR027417 -
Ahy19g0300 1015 Gene3D - 319 402 IPR042197 -
Ahy19g0300 1015 Pfam Rx N-terminal domain 6 86 IPR041118 -
Ahy19g0300 1015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 417 IPR027417 -
Ahy19g0300 1015 Coils Coil 31 51 - -
Ahy19g0300 1015 CDD RX-CC_like 2 118 IPR038005 -
Ahy19g0300 1015 PANTHER OS05G0414200 PROTEIN 30 858 - -
Ahy19g0300 1015 Gene3D - 6 120 - -
Ahy19g0300 1015 PANTHER DISEASE RESISTANCE PROTEIN RP 30 858 IPR044974 GO:0006952
Ahy19g0300 1015 Pfam NB-ARC domain 156 403 IPR002182 GO:0043531
Ahy19g0300 1015 PRINTS Disease resistance protein signature 251 265 - -
Ahy19g0300 1015 PRINTS Disease resistance protein signature 178 193 - -
Ahy19g0300 1015 PRINTS Disease resistance protein signature 355 369 - -
Ahy19g0300 1015 PRINTS Disease resistance protein signature 952 968 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0300 Ahy-Chr19 3494837 3497884 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0300 181 800 WRKY Transcription Factor Family AT5G45050 22.961 3.44e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0300 - - ahf:112709874 1575.84