LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy19g0274	ATGGCAACTTTGATGTCAAAGATGCTCAAGAAGATGAGCTTCTTCATTCTCCTCTTCTGCATCTTCCTCTCTTTCAACACCAACAACAACAGCAGCAACAGCAGAATAAGCATCACAACCACAACCACCTCCTCTTTCTGTAACCCCTCTTCTTCCTCTTCTGCTTCTTCTTGTTCTTCTTCGCACTCTCGTTCTGTTCCTCTGGACTCGTTTTCCAATTACCCTGTCTCGTTATCTGTCAAGATCAATGGTGGTGTTGGTGAAGATGATGACGACGATGATGATGAATTTGGTGTTCTTGACGCTGGTGATAATGATGATGATGACAAAAATGATTCTTCTGACGATGATGATGGTGGTGGTGAGTCACTTCAGTATGATTACTACCGAAATTCGTGCCCCAAAGCAGAACGAATTGTTCGCTCCACCATGCAACATATTCACCGCACCAAACCCTATTTGATTCCAGCTATCCTTCGCCTTGTTTTCCATGATTGTTTCATTCAGGGATGTGATGCTTCGGTTTTGTTAGATGATGATGATTACATTGATTCAGAGAAAGAGGCACCTCCCAATGGAAGCCTCAAAGGTTTTGATGTAATTGAAACCATCAAATCCAAGCTTGAAGAAGCTTGCCCTAGAATTGTTTCTTGTGCCGATATTCTTGTACTAGCTGCTAGAGACTCTGTGGCTCTGGCTGGTGGCCCCTTCTATCCATTATATACCGGCCGGAGAGATGGTTCGAACTCTTATGCTGACATTGCAACGTATGAGCTTCCTTCGCCCTATTCTGATTTATCACACACCCTTAATTCCTTCAAAGCAAAGGGATTTGATGAAAGGGAGATGGTCACTCTCCTAGGTGCCCATAGCATTGGCGAAATCCACTGCGAATTCTTCAAAAACCGCCTCTATAACTTCAGCGGCACCAATGAACCTGATCCTTCTATAGAAGTTGAATTTCTGAACCTATTGAAATCAAGATGCAGTGCATCATCTCCCTCATCTGCATCAGGATATACTTCCCACCGCACCCTTTCATCGACAGCTTTTGAGTCAACTTTTCCCAATGGCTCCCCTTCTTCCTCAGTAGAAGAGCCAGGAATTACTATGGACTTGGAACAACCTCAATCAGATTTTGGGATTACGTACTACCGCAACCTATTGCAAGGTAGAGGAATCTTGTATGCTGATCAGCAACTATTGGAAGGCGAAGTAACTCGTTATTGGATCAAGGAATATGCTCTAGATTCTACTTTGTTCCATAAACATTTCGCCCTTGCAATGATGAAACTCTCAGATCTCCATATATTGACACCGCCTATGGGTAACATTCGGCTCAATTGTTCAAAGGTTGCATGA	1362	0.4339	MATLMSKMLKKMSFFILLFCIFLSFNTNNNSSNSRISITTTTTSSFCNPSSSSSASSCSSSHSRSVPLDSFSNYPVSLSVKINGGVGEDDDDDDDEFGVLDAGDNDDDDKNDSSDDDDGGGESLQYDYYRNSCPKAERIVRSTMQHIHRTKPYLIPAILRLVFHDCFIQGCDASVLLDDDDYIDSEKEAPPNGSLKGFDVIETIKSKLEEACPRIVSCADILVLAARDSVALAGGPFYPLYTGRRDGSNSYADIATYELPSPYSDLSHTLNSFKAKGFDEREMVTLLGAHSIGEIHCEFFKNRLYNFSGTNEPDPSIEVEFLNLLKSRCSASSPSSASGYTSHRTLSSTAFESTFPNGSPSSSVEEPGITMDLEQPQSDFGITYYRNLLQGRGILYADQQLLEGEVTRYWIKEYALDSTLFHKHFALAMMKLSDLHILTPPMGNIRLNCSKVA*	454

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy19g0274	453	CDD	secretory_peroxidase	124	452	IPR033905	GO:0004601\|GO:0042744
Ahy19g0274	453	MobiDBLite	consensus disorder prediction	87	122	-	-
Ahy19g0274	453	Pfam	Peroxidase	140	415	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PRINTS	Plant peroxidase signature	196	209	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PRINTS	Plant peroxidase signature	157	177	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PRINTS	Plant peroxidase signature	215	225	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PRINTS	Plant peroxidase signature	133	152	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PRINTS	Plant peroxidase signature	427	440	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PRINTS	Plant peroxidase signature	234	249	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PRINTS	Plant peroxidase signature	281	293	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PRINTS	Plant peroxidase signature	387	404	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	Gene3D	-	124	264	-	-
Ahy19g0274	453	ProSitePatterns	Peroxidases proximal heme-ligand signature.	282	292	IPR019793	-
Ahy19g0274	453	PRINTS	Haem peroxidase superfamily signature	234	246	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PRINTS	Haem peroxidase superfamily signature	216	233	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PRINTS	Haem peroxidase superfamily signature	155	169	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PRINTS	Haem peroxidase superfamily signature	282	297	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	Gene3D	Peroxidase, domain 2	265	432	-	-
Ahy19g0274	453	ProSiteProfiles	Plant heme peroxidase family profile.	123	453	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	MobiDBLite	consensus disorder prediction	84	126	-	-
Ahy19g0274	453	PANTHER	PEROXIDASE	115	451	-	-
Ahy19g0274	453	SUPERFAMILY	Heme-dependent peroxidases	124	452	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
Ahy19g0274	453	PANTHER	PEROXIDASE 25-RELATED	115	451	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy19g0274	Ahy-Chr19	3206735	3209415	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy19g0274	124	452	Peroxidase	AT4G33870	50.450	7.29e-118	349

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy19g0274	K00430		-	twl:119991033	406.371

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy19g0274	19	3206735	3209415	Ahy19g0274	19	3206735	3209415	ECH