Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0271 ATGGATTTCTGGCCAGAGTTTCTTGCATCAAGTTGGGGAAAAGAGTTTGTAGCTGGAGGGTTTGGAGGGATTGCTGGAATTGTATCTGGTTATCCATTAGATACAATAAGGATAAGGCAACAAAGCTCAAACATTTTTGGTGGTTCATCATCATCAGCATTCAGTGTTCTTAGAAATGCTATTGCTAAGGAAGGACCAGCTTCTCTCTACCGTGGCATGGGTGCACCTTTGGCCTCTGTTACATTTCAGAATGCTGCAGTTTTCCAAACTTATGCAGTTCTCTCAAGAGTTTTTGACAAATCTGTTTCTCCCAAAGACCCTCCTTCCTATAAGGGTGTAGCATTAGGAGGAGTTGGCACTGGTGCTCTCCAGAGCATAATTCTTTCCCCAGTAGAGCTGATTAAGATTCGTCTTCAACTGCGCCGCGGTGCAAACCACTTGACAGAACCCCAAAAGGGTCCTGTTATGGTTGCCAAGAACATATGGAGAAAGGAAGGACTCAGAGGAATCTACAGAGGACTAGGCATCACTGTGATAAGAGATGCACCTGCCCATGGTATCTATTTCTGGACATATGAATACGTAAGAGAACAGCTTCACCCGGGATGTAGAAGAAGTGGCCAAGAAAGCTTGACAACTATGTTAACAGCAGGTGGGTTAGCTGGGGTAACAAGCTGGATTTCTTGCTACCCTTTTGATGTTGTGAAAACGAGGTTACAGGCACAAACACCAGATTCTTTAAAATACAATGGCATTGTTGATTGCCTTAGAAAGAGTATTAAGGAAGAAGGGCATGCTGTTCTATGGCGTGGACTAGGAACTGCAGTTGCTAGAGCTTTTGTGGTGAATGGTGCTGTGTTTGCAGCATATGAGATAACACTAAGGTTATTGTTTAGTAATGGAAATATTCAAATGCAGGAAACTATATAA 930 0.4301 MDFWPEFLASSWGKEFVAGGFGGIAGIVSGYPLDTIRIRQQSSNIFGGSSSSAFSVLRNAIAKEGPASLYRGMGAPLASVTFQNAAVFQTYAVLSRVFDKSVSPKDPPSYKGVALGGVGTGALQSIILSPVELIKIRLQLRRGANHLTEPQKGPVMVAKNIWRKEGLRGIYRGLGITVIRDAPAHGIYFWTYEYVREQLHPGCRRSGQESLTTMLTAGGLAGVTSWISCYPFDVVKTRLQAQTPDSLKYNGIVDCLRKSIKEEGHAVLWRGLGTAVARAFVVNGAVFAAYEITLRLLFSNGNIQMQETI* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0271 309 SUPERFAMILY Mitochondrial carrier 11 291 IPR023395 -
Ahy19g0271 309 Pfam Mitochondrial carrier protein 115 199 IPR018108 -
Ahy19g0271 309 Pfam Mitochondrial carrier protein 11 100 IPR018108 -
Ahy19g0271 309 Pfam Mitochondrial carrier protein 210 300 IPR018108 -
Ahy19g0271 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 296 IPR018108 -
Ahy19g0271 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Ahy19g0271 309 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 299 - -
Ahy19g0271 309 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Ahy19g0271 309 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Ahy19g0271 309 PRINTS Mitochondrial carrier protein signature 171 189 IPR002067 GO:0055085
Ahy19g0271 309 PRINTS Mitochondrial carrier protein signature 218 240 IPR002067 GO:0055085
Ahy19g0271 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 108 198 IPR018108 -
Ahy19g0271 309 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 299 - -
Ahy19g0271 309 Gene3D Mitochondrial carrier domain 14 307 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0271 Ahy-Chr19 3174754 3178053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0271 1 300 Antiporters AT1G79900 69.333 1.93e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0271 K15109 - gmx:100812056 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0271 19 3174754 3178053 Ahy19g0271 19 3174754 3178053 ECH