Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0244 ATGGTAAAGCACGTTTCCTCAGAGGTTCATCGCGTTAAAATTCCTTGTCCGATTTGCATGGACCGTGATTTGAATGTGGAGGATTGCCGCAATATTCTTCCAAAGAAGGTTTTCGATCTGTGGGGAAAATTATTGTGTGAAGCCGGGATACCTGAGGATGACAAATTCTATTGTCCCTTTAAGGACTGTTCTGCGCTCATGATCGATGATGGTGTGTGCAGAAAATTGGCAAGAAAATTTAAGTGTCCTCATTGTGATAGAATGTTTTGTGCAGAGTGCAAGGTTGCTTGGCACCATGGAATCAGGTGCAAGAAGTTTCAGAGTCGTAACAAAGACAGGATGGAAAAGGAGGATGTTATGCTGATGGAATTGGCGAAGAAAATGCAATGGCAGAGGTGCCCTAATTGCAAATTCTATGTTGAGAAAACTGGTGGGTGCAGTCACATGATGTGTAGGTGTGGAGAGACTTTCCTTTACTTATTAGGATGTGGAATTGAATAG 501 0.4251 MVKHVSSEVHRVKIPCPICMDRDLNVEDCRNILPKKVFDLWGKLLCEAGIPEDDKFYCPFKDCSALMIDDGVCRKLARKFKCPHCDRMFCAECKVAWHHGIRCKKFQSRNKDRMEKEDVMLMELAKKMQWQRCPNCKFYVEKTGGCSHMMCRCGETFLYLLGCGIE* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0244 166 SUPERFAMILY RING/U-box 52 107 - -
Ahy19g0244 166 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 1 161 - -
Ahy19g0244 166 SMART ibrneu5 39 103 IPR002867 -
Ahy19g0244 166 Pfam IBR domain, a half RING-finger domain 54 103 IPR002867 -
Ahy19g0244 166 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 1 161 IPR031127 GO:0004842|GO:0016567
Ahy19g0244 166 Gene3D - 100 164 - -
Ahy19g0244 166 SUPERFAMILY RING/U-box 117 157 - -
Ahy19g0244 166 ProSiteProfiles TRIAD supradomain profile. 1 166 IPR044066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0244 Ahy-Chr19 2675866 2676366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0244 15 162 C3H Transcription Factor Family AT2G19610 32.051 8.66e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0244 K11975 - aip:107614633 261.536