Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0194 ATGTCCGCGCCAAAGCAAGGTCCGTTCTCCAGCGGCCGAGAAATCTCGGCCGCTGAAGAGGGAAAGAATAAGGAAGGTGGTGGACATAGTAGAAAGGAGAAGAAGGTTCCTTGGATGAAGCTATTCTCATTTGCTGATTTTTATGATTGTGTTTTAATGAGTGTTGGATCCATTGGGGCATGTGTTCATGGTGCTTCTGTTCCTGTTTTCTTTATTTTCTTTGGAAACATGATCAATGTTACTGGCTTGGCTTTCCTTCATCCCAAACAAGCTTCTCATCAAGTTGCCAAGTATTCGTTGGATTTTGTGTATCTAAGCATAGTAATATTGTTTGCGTCTTGGACAGAGGTTGCTTGTTGGATGCACAGTGGGGAACGTCAAGCAGCAAAGATGAGAATGGCTTATTTAAGATCAATATTGAATCAAGATATTACTTTATTTGATACAAATGCATCAAGTGCTGAACTTATTTCTGCTATTACAACTGACATTATTCTTGTTCAAGATGCACTATCTGAAAAGGCAGGAAATTTCTTGCACTATATAAGCAGATTTGTAGCAGGGTTTGCCATTGGGTTCGCTAGAGTGTGGCAGATAAGTTTGGTAACACTTGCAATTGTACCCTTAATAGCCCTTGCTGGAGGTGCTTATGCATATGTCTCATTTGGCCTACTTTCCAAACTTAAAAAATCCTATCTTAGGGCTGGTGAGATTGCTCAAGAGGTGATAGGAAATGTGAGAACAGTGCAAGCATTCTCAGGAGAAGAAAGAGCAGTGAAATCATACAAAGCAGCATTGATGGACACATATAAAAATGGCAGAAAAGCAGGTTTAGCAAAAGGTCTAGGACTAGGGTCTATGCACTGTGTCCTTTTCCTATCATGGGCTTTGCTTGTTTGGTTCACTAGCATTGTTGTTCATAAGAAAATTGCCAATGGTGCTGTCTCTTTCACTACCATGCTCAACGTTGTCATCTCTGGCCTGTCACTTGGACAAGCAGCACCAGATATATCTGCATTTATCATAGCAAGAGTAGCTGCATATCCTATTTTTGAGATGATAGAAAGAGACAAAGTAAATAAAACATCCTCAAAAACTGGTCAAACCTTAACCAAATTGGAGGGAAACATCAAATTCAATAATGTCTGTTTCAATTACCCTTCTCGTCCGGATGTAACCGTCTTCAACAACCTTTGCCTTGAGATTCCGCCGGCGAAAATCGTAGCCCTTGTGGGAGGAAGTGGATCCGGAAAAAGCACTGTAATATCATTGATTGAGAGATTCTATGAACCATGTTGTGGTCAAATACTACTAGATGGATACAATATAAAGGACCTTGATCTCAAATGGCTAAGAATGCAAATTGGACTAGTTAATCAAGAACCTGCACTTTTTGCTACAAGCATTAAGGAGAATATATTGTATGGAAAAGATGATGCAACACTTGATGAAATAAATCATGCTCTGAAGCTTTCAGATGCTCAATCTTTCATTAACAATCTCCCAGATGGATTAGAGACTAAGGTTGGTGAGAGAGGAATACAACTATCTGGAGGACAGAAGCAAAGGATTGCAATATCTCGTGCCATTGTTAAGAATCCATCGATTCTTTTATTGGATGAAGCAACCTCTGCTCTTGATGCAGAGTCAGAGAAGAGTGTACAAGAGGCTCTTGATGGAATCATGGTTGGTAGAACAACTTTGATTGTGGCACATAGGCTTTCTACCATTAAGAATGCAGATATTATTGTTGTTCTGAATGAAGGCAAGATTGTTGAAATTGGAAACCATGACCACCTTATTTCTAACAAAAATAGTGTTTATGCATCTCTAGTTGAAATCCAGCAGGACTCTTCTACCTCTTTGCAGCAGCACCAAACTTGTGTGGATTCTAGCATGGCACCAACTTCGAGCATATCTGGTGCAACAAGCTTGGGTGCTAGTTTTCATTCAGATAAAGAATCTGTTGGGCGTTGTGGTTATAAAGAAGCAGCAGAAAGTGTTGGAAACAAGTCAAAGCGTGTCTCAACAACAAGACTTTATTCAATGGTTGGTCGTGACTGGTATTATGGAGTTTTTGGAACCTTAGGTGCATTTATTGTTGGAGCCATGATGCCACTTTTTGCCCTTGGAATCACTCATTCTCTTGTAGTGGAATACTACATGGATTGGAACACCACAAGTCGTGAGATTACAAAAATTGCTTTTCTCTTTTGTGGAGCAGCAATTTTAGATATCACTGCTTATACCATTGAATATTTCTCTTTCGGAATCATGGGCGAGCGCCTAACTCTTCGTGTCAGAGAGAATATGTTTTCTGCTATTTTGAGGAACGAAATTGGTTGGTTTGATGATACTAGCAACTCAAGTTCTATACTTTCATCTCGTTTAGAAGCTGATGCAACATTATTGAAAACTATTGTTGTGGATCGATCTACAATTCTCTTACAGAATATTGCTCTGATTGTTACTTCATTTATAATTGCCTTCACTTTGAGCTGGAGGATTACCCTTGTTGTCTTGGCTACATACCCTTTGATCATCAGTGGTCACATTAGCGAGAAACTCTTTATGAAAGGCTTTGGTGGCAACTTGAGCAAAGCATATCTCAAAGCAAACATGTTGGCCGGCGAAGCTCTGAGCAATATGCGAACCGTTAAAGCATTCTGTTCCGAAGAAAAACTCCTTCGACTATATGCTAAATCACTTGTTGAACCATCGAAGCGCTCGTTCAAACGAGGCCAAATCGCTGGAATATTCTATGGCATATCTCAGTTCTTTATCTTCTCTTCCTATGGCCTTGCCTTATGGTATGGATCTGTATTGATGGAGAAGGAGCTTTCTAGCTTTAAATCAGTTATTAAGTCATTCATGGTTTTAATCATAACCGCGCTGGCCATGGGGGAGACATTGGCAATGGCGCCGGATATGCTGAAAGGAAATCAAATGGCTGCATCAGTTTTTGAAGTGATGGATAGAAGAACAAGTATAAGAAGTGATGTTGGAGAAGAGTTGCTTGCAGTTGAAGGAACAATTGAGCTAAAAAATATCCATTTTCGCTACCCTTCAAGGCCTGATGTGGTTATTTTTAATGATTTCAATCTTAGAGTTCCTTCAGGGAAGACTGTGGCCTTGGTAGGACACAGTGGTTCTGGAAAAAGCTCTGTCATCTCGCTTATACTTAGATTTTATGATCCAACATCTGGAAGAGTAATGATTGATGGAAAAGACATCAAGAATCTAAACCTAAAATCTGTTAGGAAACACATTGGTTTTGTGCAACAAGAACCGGTTCTTTTCGCAACATCAATTTATGATAATATTCTTTATGGGAAGGAAGGAGCATCTGATTCAGAAATAGTTGAAGCAGCTAAGCTTGCAAATGCTCATAGCTTTATCAATGGTTTTCCTGAGGGCTACTCCACCAAAGTAGGGGAAAGAGGAGTTCAACTTTCTGGTGGTCAGAAACAAAGGATAGCTATTGCCAGGGCAATCTTGAAAAACCCTGCAATCTTGTTGCTGGATGAAGCCACTAGCGCGCTTGACGCAGAGTCAGAGCGCGTGGTACAACAAGCACTAGAAAAATTGATGCAGAATAGAACAACAGTTATGGTTGCTCATAGGCTATCCACAATAAGAAATGCATATCAAATCTCTGTTGTAAATGATGGAAAGATTGTTGAGCAAGGAACTCATTCAAGTCTAATAGAGAACAAGAGTGGAGCATATTATAAATTAGTTAGTCTTCAGCAGCAGAATGTACATGAACATAGTGGATGA 3780 0.3984 MSAPKQGPFSSGREISAAEEGKNKEGGGHSRKEKKVPWMKLFSFADFYDCVLMSVGSIGACVHGASVPVFFIFFGNMINVTGLAFLHPKQASHQVAKYSLDFVYLSIVILFASWTEVACWMHSGERQAAKMRMAYLRSILNQDITLFDTNASSAELISAITTDIILVQDALSEKAGNFLHYISRFVAGFAIGFARVWQISLVTLAIVPLIALAGGAYAYVSFGLLSKLKKSYLRAGEIAQEVIGNVRTVQAFSGEERAVKSYKAALMDTYKNGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSIVVHKKIANGAVSFTTMLNVVISGLSLGQAAPDISAFIIARVAAYPIFEMIERDKVNKTSSKTGQTLTKLEGNIKFNNVCFNYPSRPDVTVFNNLCLEIPPAKIVALVGGSGSGKSTVISLIERFYEPCCGQILLDGYNIKDLDLKWLRMQIGLVNQEPALFATSIKENILYGKDDATLDEINHALKLSDAQSFINNLPDGLETKVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDGIMVGRTTLIVAHRLSTIKNADIIVVLNEGKIVEIGNHDHLISNKNSVYASLVEIQQDSSTSLQQHQTCVDSSMAPTSSISGATSLGASFHSDKESVGRCGYKEAAESVGNKSKRVSTTRLYSMVGRDWYYGVFGTLGAFIVGAMMPLFALGITHSLVVEYYMDWNTTSREITKIAFLFCGAAILDITAYTIEYFSFGIMGERLTLRVRENMFSAILRNEIGWFDDTSNSSSILSSRLEADATLLKTIVVDRSTILLQNIALIVTSFIIAFTLSWRITLVVLATYPLIISGHISEKLFMKGFGGNLSKAYLKANMLAGEALSNMRTVKAFCSEEKLLRLYAKSLVEPSKRSFKRGQIAGIFYGISQFFIFSSYGLALWYGSVLMEKELSSFKSVIKSFMVLIITALAMGETLAMAPDMLKGNQMAASVFEVMDRRTSIRSDVGEELLAVEGTIELKNIHFRYPSRPDVVIFNDFNLRVPSGKTVALVGHSGSGKSSVISLILRFYDPTSGRVMIDGKDIKNLNLKSVRKHIGFVQQEPVLFATSIYDNILYGKEGASDSEIVEAAKLANAHSFINGFPEGYSTKVGERGVQLSGGQKQRIAIARAILKNPAILLLDEATSALDAESERVVQQALEKLMQNRTTVMVAHRLSTIRNAYQISVVNDGKIVEQGTHSSLIENKSGAYYKLVSLQQQNVHEHSG* 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0194 1259 ProSitePatterns ABC transporters family signature. 516 530 IPR017871 GO:0005524
Ahy19g0194 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1012 1248 IPR003439 GO:0005524
Ahy19g0194 1259 CDD ABC_MTABC3_MDL1_MDL2 377 615 - -
Ahy19g0194 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 377 613 IPR003439 GO:0005524
Ahy19g0194 1259 ProSitePatterns ABC transporters family signature. 1151 1165 IPR017871 GO:0005524
Ahy19g0194 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1006 1250 IPR027417 -
Ahy19g0194 1259 MobiDBLite consensus disorder prediction 1 31 - -
Ahy19g0194 1259 CDD ABC_6TM_Pgp_ABCB1_D1_like 53 350 - -
Ahy19g0194 1259 CDD ABC_6TM_Pgp_ABCB1_D2_like 681 997 - -
Ahy19g0194 1259 Gene3D - 1002 1251 IPR027417 -
Ahy19g0194 1259 Gene3D - 367 616 IPR027417 -
Ahy19g0194 1259 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 29 1253 IPR039421 -
Ahy19g0194 1259 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 29 1253 - -
Ahy19g0194 1259 CDD ABC_MTABC3_MDL1_MDL2 1012 1250 - -
Ahy19g0194 1259 Pfam ABC transporter transmembrane region 58 325 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g0194 1259 Pfam ABC transporter transmembrane region 693 965 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g0194 1259 MobiDBLite consensus disorder prediction 17 31 - -
Ahy19g0194 1259 Gene3D ABC transporter type 1, transmembrane domain 926 1253 IPR036640 GO:0005524|GO:0016021
Ahy19g0194 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 615 IPR027417 -
Ahy19g0194 1259 Pfam ABC transporter 396 544 IPR003439 GO:0005524
Ahy19g0194 1259 SUPERFAMILY ABC transporter transmembrane region 35 347 IPR036640 GO:0005524|GO:0016021
Ahy19g0194 1259 SUPERFAMILY ABC transporter transmembrane region 679 992 IPR036640 GO:0005524|GO:0016021
Ahy19g0194 1259 Gene3D ABC transporter type 1, transmembrane domain 40 625 IPR036640 GO:0005524|GO:0016021
Ahy19g0194 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 55 340 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g0194 1259 Pfam ABC transporter 1031 1179 IPR003439 GO:0005524
Ahy19g0194 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 691 979 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy19g0194 1259 Gene3D ABC transporter type 1, transmembrane domain 651 860 IPR036640 GO:0005524|GO:0016021
Ahy19g0194 1259 SMART AAA_5 404 598 IPR003593 -
Ahy19g0194 1259 SMART AAA_5 1039 1211 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0194 Ahy-Chr19 1977010 1988256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0194 19 1251 Calmodulin-binding Proteins AT2G36910 49.009 0.0 1199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0194 K05658 - gmx:100809752 1898.25