Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0115 ATGGAGGAGTCAGGGGAAAATTGGCCTTCGGATTCTGATTTGGAAATGGGTGATGATGACAATAATAATGATTATTGTTATGATGATGAAGAAGAATTGGGTTGTGATGAAGAGATTCAATATTTTGCTGAAGAAGAAGCTTTAGATCCTATTATGGATGAGACCCAAAGGAAGAAGAAACAAAGGGAACTTGAAGAGAGATTGCTTGCACTTTCAGCCACCATACCCAGTAGTGGCTTCAAGAATAACAAGATGGACGATAGATCAATCCTTGACAATGCTAGCAACTACGTGAAACAACTCCAACAACGTGTGAGGGAGCTAGAACAAGAAGTTGGTGGTGGATCCAACAACAACAAAGGTGGTGGCAATAATATTAATCTTCCTGAGGTCAAAGTAAGAGTGTTGCAAAACGAAGTGCTCATCATAATCCATTGTGAGAAACAAAAGGGTTTGATGCTCAAAATTCTAACAAAGCTTGAGAATCTTCATCTTTCGGTTCTCAATAACAGTGTCTTGCCATTTGGGAAATCAACCCTCGACATAACCATTGTTGCTCAGATGGGAGATAGATACAGCATGACAGTGAAGGAATTAGTGAAAACCCTGAGATTAACTATCTTGACACAATAG 633 0.3934 MEESGENWPSDSDLEMGDDDNNNDYCYDDEEELGCDEEIQYFAEEEALDPIMDETQRKKKQRELEERLLALSATIPSSGFKNNKMDDRSILDNASNYVKQLQQRVRELEQEVGGGSNNNKGGGNNINLPEVKVRVLQNEVLIIIHCEKQKGLMLKILTKLENLHLSVLNNSVLPFGKSTLDITIVAQMGDRYSMTVKELVKTLRLTILTQ* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0115 210 Gene3D - 53 118 IPR036638 GO:0046983
Ahy19g0115 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 58 114 IPR036638 GO:0046983
Ahy19g0115 210 MobiDBLite consensus disorder prediction 1 30 - -
Ahy19g0115 210 Coils Coil 91 118 - -
Ahy19g0115 210 PANTHER BHLH TRANSCRIPTION FACTOR 47 210 - -
Ahy19g0115 210 PANTHER PROTEIN, PUTATIVE-RELATED 47 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0115 Ahy-Chr19 1066299 1070417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0115 47 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.889 2.20e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0115 - - aip:107616596 345.51