Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0113 ATGGATGATTTTTCATGGGAGCATTTGCATCTTCAATTGGAAATGGATGATGAGAATATGAACAATAATAATTTCTTATTATTAGAAAATGAATATGGTGATGGTGTTGATGATGATAATAATGAAGATGATGAGTTCTTAAGAGAAATCCTAATGTTGCAACCATCTTTCTCTTCTGAAAATAGCGAAAGTGATAATCATAATCATCATGATCATGATCATCACTCTCTTCTTCATCATTCTTCTTCTTCTTCCACTCTTCTCCAAAACACCGTTGGATCATCATCACCGCAAGATCTGACGGCTGAGAATTCAAAGAAGAATAACACTATGAAACAACCTCGTAGATCATCATCATCATCGTCACTACGTTGTTCTTCTCCGAGGAGATACATTTTGTCATTTGATAACTCAACCATGACACCAGCTACACCAAATCAATTACAAGAAGATCCTTATTATGCAAACAATAATAATAATAATAATAATAATAATAATAATAAGAACAAGAAGAACAAAGATCCATCATCATGTGATTATTCTTCTCCAAAAAGGGTGGTGCCGATTTGTACAAATAGTGAGAATAAAAAGGAGGAAGGTGCAATAACAACAAAGAGGGGAAGAAGCTCTTCACAAACAATGGATCACATAATGGCAGAGAGAAAGAGGAGACAAGAACTCACTGAGAGGTTCATAGCACTCTCTGCTACCATCCCTGGCTTGACCAAGACAGACAAGGCATCAATACTTAGAGCAGCCATAGATTATGTGAAGCAACTTCAAGAGCGGGTGCAAGAATTAGAAAAGCAAAACAAGAAGAGGAGCAGAGAGTCAGTGATATTGGTGAAAAAATCGAAGAACATTAATAATGAAAAAATATTATTAGAAGAAAGTACAATAATATCAACAAGTGAAACAAGAAGAAGTGAAGATGGTGGAACAGGCCTCCCTGATATTGAAGCAAGATTTATGGGGAAAGATGTTCTGATTGAGATTCATTGTGAGAAGGAAAATGGCATTGAGATGAAAATACTTAATCAGCTTGAAAATCTTCATCTTTTTGTCACTGGAAGTAGTGTTCTTCCTTTTGGCAATTCTGCTCTTGGGATCACTATTATTGCTAAGATGGGAGATTCGTGTGAAATGACAGTGAATGATGTGGTCAGAAATCTTAGGGAAGTGTTCTTGAAGGCACATCAAAATTCACATGGCATTTAA 1218 0.3571 MDDFSWEHLHLQLEMDDENMNNNNFLLLENEYGDGVDDDNNEDDEFLREILMLQPSFSSENSESDNHNHHDHDHHSLLHHSSSSSTLLQNTVGSSSPQDLTAENSKKNNTMKQPRRSSSSSSLRCSSPRRYILSFDNSTMTPATPNQLQEDPYYANNNNNNNNNNNNKNKKNKDPSSCDYSSPKRVVPICTNSENKKEEGAITTKRGRSSSQTMDHIMAERKRRQELTERFIALSATIPGLTKTDKASILRAAIDYVKQLQERVQELEKQNKKRSRESVILVKKSKNINNEKILLEESTIISTSETRRSEDGGTGLPDIEARFMGKDVLIEIHCEKENGIEMKILNQLENLHLFVTGSSVLPFGNSALGITIIAKMGDSCEMTVNDVVRNLREVFLKAHQNSHGI* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0113 405 PANTHER BHLH TRANSCRIPTION FACTOR 5 400 - -
Ahy19g0113 405 SMART finulus 217 266 IPR011598 GO:0046983
Ahy19g0113 405 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 211 260 IPR011598 GO:0046983
Ahy19g0113 405 MobiDBLite consensus disorder prediction 196 215 - -
Ahy19g0113 405 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 5 400 - -
Ahy19g0113 405 Pfam Helix-loop-helix DNA-binding domain 215 261 IPR011598 GO:0046983
Ahy19g0113 405 Gene3D - 209 283 IPR036638 GO:0046983
Ahy19g0113 405 MobiDBLite consensus disorder prediction 80 171 - -
Ahy19g0113 405 MobiDBLite consensus disorder prediction 63 79 - -
Ahy19g0113 405 MobiDBLite consensus disorder prediction 57 186 - -
Ahy19g0113 405 Coils Coil 250 277 - -
Ahy19g0113 405 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 208 281 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0113 Ahy-Chr19 1025616 1030894 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0113 204 392 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 50.256 8.28e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy19g0113 HLH 1.40E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0113 - - ahf:112779544 656.366