Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0078 ATGGCTCCAGAGCATCCACAGTTTATGTCAAGCACTGGCAATCACAGCTTCACAAATGCACCCTTAATAGACTCCATTGATGTTCACCAAATTGAAGTTCCTGATAGGAGGAGTTGGAAGAATTTATTTGCATATATGGGGCCTGGATTTCTTGTTTCTATTGCATACATAGACCCAGGAAACTTTGAGACGGATCTTCAATCTGGAGCACAATATAAATATGAGTTACTTTGGATTGTATTGTTGGCATCATGTGCTGCTCTTGTGATTCAATCAATGGCAGCAAATCTTGGAGTTGTAACTGGAAAGCACTTGGCAGAGCATTGTAGAACTGAATATCCGCAAGTACCCAACACGATCCTTTGGATCATTGCTGAAATTTCTGTTGTGGCATGTGATATTCCAGAAGTAATTGGAACAGCTTTTGCATTGAACATGCTCTTCAGTATACCTGTTTGGATTGGTGTTCTTCTTACAGGGCTAAGTACATTGATTCTCTTAGCATTACAACAATATGGGATTAGAAAACTCGAATTCTTAATTGCTTTTCTGGTATTTACCATCTGTGCTTGCTTTATGGCTGAGCTTGGATATGCAAAGCCTGATGCAAAAGAAGTTGTGAAGGGTATGTTTGTTCCACAGCTTAAAGGAAATGGTGCTACCGGTCTTGCAATTTCGCTCCTCGGCGCTTTGGTTATGCCACACAATCTCTTCCTCCACTCTGCATTAGTACTTTCGAGGAAAATACCTCGATCCGTTCGTGGAATCAAGGAAGCTTGCAGATTTTACATGATAGAAAGTGGATTTGCTCTTATGGTGGCCTTCCTCATAAATATCTCTGTTATTTCTGTAAGTGGTGCAGTTTGCAATTCTTCAAATTTGAGTGCAGATGATCAGAAGAGCTGTGAGGATTTGGATTTGAACAAAGCCTCATTTCTACTAAGAAATGTGTTGGGGAAATGGAGTTCAAAACTCTTTGCAATTGCTTTGCTAGCATCTGGTCAAAGTTCTACCATTACAGGAACATATGCAGGGCAATATGTCATGCAGGGTTTTCTAGATTTGAGACTGAAGCCATGGATTAGGAACATGTTAACTCGTTGCTTAGCCATTACTCCTAGTTTGGTTGTAGCACTGATTGGTGGCTCTTCCGGTGCCGGAGAGCTCATAATTATTGCATCTATGATATTATCATTTGCGCTTCCGTTCGCCTTGATTCCACTTCTCAAGTTCACTAGCAGCAAAACCAAGATGGGAGAACATGTTAACTCTTTGATGATCGCGTCTGTTACTTGGATGATCGGGTCGTTGATCATGACCATAAACATATACTACTTAATATCTAGCTTCATAAAGTTGCTTCTTCATGCTAAGATGAAAATGGTTGGAAAAGTGTTTGTGGGAATACTAGGATTCTCGGGCGTGGCGGTGTACTTAGCCGGAATTGCATATCTGGTGGTGAGGAAGAACAGAAAGGCGACACCATTTTTGGCACTAACATCAGCAGCAGCAGAGGATTGCAATGAGTCACTTTCTCATCTTCCAAGAGAAGACATAGTAAGCATGCAATTGCCTGAGAGAATTGTTAGTCCAGCAGATATTTGA 1605 0.4106 MAPEHPQFMSSTGNHSFTNAPLIDSIDVHQIEVPDRRSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIVLLASCAALVIQSMAANLGVVTGKHLAEHCRTEYPQVPNTILWIIAEISVVACDIPEVIGTAFALNMLFSIPVWIGVLLTGLSTLILLALQQYGIRKLEFLIAFLVFTICACFMAELGYAKPDAKEVVKGMFVPQLKGNGATGLAISLLGALVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMIESGFALMVAFLINISVISVSGAVCNSSNLSADDQKSCEDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKPWIRNMLTRCLAITPSLVVALIGGSSGAGELIIIASMILSFALPFALIPLLKFTSSKTKMGEHVNSLMIASVTWMIGSLIMTINIYYLISSFIKLLLHAKMKMVGKVFVGILGFSGVAVYLAGIAYLVVRKNRKATPFLALTSAAAEDCNESLSHLPREDIVSMQLPERIVSPADI* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0078 534 PANTHER METAL TRANSPORTER NRAMP1 8 529 - -
Ahy19g0078 534 PRINTS Natural resistance-associated macrophage protein signature 149 168 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy19g0078 534 PRINTS Natural resistance-associated macrophage protein signature 121 147 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy19g0078 534 PRINTS Natural resistance-associated macrophage protein signature 394 413 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy19g0078 534 PRINTS Natural resistance-associated macrophage protein signature 174 195 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy19g0078 534 PRINTS Natural resistance-associated macrophage protein signature 362 379 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy19g0078 534 PRINTS Natural resistance-associated macrophage protein signature 224 247 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy19g0078 534 PRINTS Natural resistance-associated macrophage protein signature 334 353 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy19g0078 534 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 8 529 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy19g0078 534 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 41 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy19g0078 534 Hamap Divalent metal cation transporter MntH [mntH]. 34 450 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy19g0078 534 Pfam Natural resistance-associated macrophage protein 62 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0078 Ahy-Chr19 715030 719049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0078 10 534 Inorganic Solute Cotransporters AT1G15960 78.368 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0078 K21398 - gmx:100808501 866.3