Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0027 ATGCATGTTCAGCAAGCAGCACTCGTGCTCAATGCATCAAGGCGCTTTAGATATACCTTGGACCTAAAAAAGGAAGAGGAGAGACAGCAAAAGAAAAGCTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCATTGCTTTTCAGATTGGCTGGTGAACGTGAATTAGTGATAACAGCACCGACACCTGCACATCCAGTTGGTGACTTTGGAATTGGGCTCGAACAACTTTCTTCAGTTTCTAAGGAGCAGAACACTTCTGCTTTAGAAGAATATGGAGGGGTCAAGGGCTTATCAAATTTATTAAGGTCAAATCTCGATAAAGGAATTAGTGGAGATGATGCTGATTTACTAAAAAGGAAAAATGCTTATGGAACTAACACATATCCTCGGAAAAAAGGAAGAAGCTTCTGGAGGTTTTTATGGGAAGCATGGCAAGATCTAACTCTTATAATATTGATTATAGCAGCAGTTGTCTCATTGGTGCTTGGAATAAAAACAGAGGGTTTGAGTGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCGGTTTTTCTGGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTAAGAATTTGAATGCAGAGAAACAAAATATACAGTTGGAGGTCATGAGAGGTGGCAGAACAGTTAAATTGTCGATATTTGACATTGTTGTTGGTGATGTAGTACCGCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTATTAATCACGGGTCATTCACTTGCCGTTGATGAATCCAGTATGACGGGTGAAAGCAAAATTGTTCACAAGGATCACAAATCACCCTTTTTGATGTCTGGTTGCAAAGTGGCTGATGGAGTTGGAGTTATGCTGGTAACTGGTGTTGGTATAAATACAGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGATAATGGAGAAGAGACTCCATTGCAGGTACGTTTGAATGGAGTAGCAACTTTTATTGGTGTAGTTGGGCTTTCTGTAGCTGTTTTAGTGCTAGCAGTCCTCTTGGGCAGATACTTTTCTGGCCATTCTACTGATGATGATGGAAACGTGGAATTTGTTGCCGGAAAAACTAAAGCAAGTACTGCAGTTGATGGCGTCATCAAAATTTTCACCATTGCAGTAAGTCCGAGTTTGAACTATTTCGTCCATCTTCTTCTTCAAACTTTTAGTAGTTTGAAACTAAATACGGAGCCATGCATGCAGGTTACCATTGTGGTTGTCGCAGTGCCTGAAGGTCTACCTTTGGCTGTTACCTTAACCCTGGCATACTCAATGCGGAAAATGATGAGAGACAAAGCCCTGGTTCGGAGGCTGTCAGCCTGTGAAACTATGGGCTCTGCGACAACAATATGCAGTGATAAGACAGGAACATTGACCTTAAATCAGATGACTGTAGTTGAGGCATATGTTGGAAGGAACAAATTAAATCCACCAGATGACTCATCAAAGTTAAATCCGGAAGTTTTATCCTTGATAAACGAGGGCATTGCCCAGAATACTACTGGAAATGTTTTTGTGCCTAAGGAAGGGGGAGAGGCAGAGATTTCAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTAAAGTTGGGTATGAATTTCAGTCTTCTCAGATCAAATACGACAGTTCTCCATGTCTTCCCCTTTAATTCCGAGAAAAAAAGAGGCGGTGTTGCTGTGAAGCTGGAGGGCTCTGGAGTACATATACATTGGAAAGGAGCTGCAGAAATACTTCTTGGAGCATGTACGCAATATCTTGATTCAGATGGTCATTTGCAATCCATTGAGGGAGAGAAGGTAGCTTTCAAGGAGGCTATTGATAACATGGCTGCTCGCAGCTTGCGTTGTGTTGCCATTGCTTACAGATCATATGAATTAGACAAAGTTCCATCTAATGAAGATGATTTGGCCCAATGGTCGTTACCAGAAAATGATCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGTGTCAAAGAAGCAGTGGAACTATGCTCTAAAGCTGGTGTCAAGGTACGCATGGTTACCGGAGACAACCTTCAAACAGCAAGGGCAATAGCTTTGGAGTGTGGGATACTTACTTCAAATGAGGAAGCTGTTGAACCAGTTATAATTGAAGGGAAGAAATTCCGTGCACTAAGCGAAAAAGAAAGGGAACAGATTGCTAAGAAAATAACGGTCATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCTCTACGTAAAGGAGGTGAAGTTGTTGCCGTCACAGGAGATGGAACCAATGATGCCCCTGCACTTCACGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTGGATGATAACTTTGCGTCAGTAGTAAAGGTTGTCCGGTGGGGACGTTCTGTTTATGCAAATATTCAGAAATTCATCCAGTTCCAGCTTACTGTTAATGTTGCTGCTCTTGTAATTAATGTTGTTGCAGCAATATCCTCTGGTGATGTTCCTTTGAATGCAGTACAGCTTCTGTGGGTCAACCTTATCATGGACACACTTGGGGCGCTTGCACTGGCCACTGAACCACCAACGGACAGCCTTATGCGCAGAGCACCTGTTGGGCGAAGGGAACCTCTTATAACGAATGTCATGTGGAGAAACTTGGTTGTACAGGCTGTCTATCAAGTTACTGTTCTTCTGGTTCTGAACTTCGCTGGTGAAAGTTTCATACCTAAGCAAGAAACTAAATCCCTTGACAGTCAAACCAAGAACACTTTAATATTCAATGCATTCGTCCTGTGCCAAATATTCAACGAGTTCAATGCTCGGAAACCAGAAGGAATGAATGTATTCCAAGGGGTGACTAAGAACCGTCTTTTCATGGGAATTGTTGGAATGACCTTTATCCTTCAGATAATTATCATCGAGTTCCTTGGAAAGTTCACCACAACAGTGAAACTTGATTGGAAGCTGTGGATTGCTTCTCTTGTTATTGGCATTGTCAGCTGGCCTCTTGCTGTTGCCGGAAAACTCATTCCGGTTCCCAAAACACCATTGTCACGCTGCTTAGCCAAGCCACTTAGAAGATGGAGAAGGTCTCGCGCACAAAGTCAACTGAACACCCCCAGCACTAATTTTTCACGTTAA 3204 0.4267 MHVQQAALVLNASRRFRYTLDLKKEEERQQKKSLIRAHAQVIRAALLFRLAGERELVITAPTPAHPVGDFGIGLEQLSSVSKEQNTSALEEYGGVKGLSNLLRSNLDKGISGDDADLLKRKNAYGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAVVSLVLGIKTEGLSEGWYDGGSIAFAVFLVIVVTAVSDYRQSLQFKNLNAEKQNIQLEVMRGGRTVKLSIFDIVVGDVVPLKIGDQVPADGVLITGHSLAVDESSMTGESKIVHKDHKSPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGVVGLSVAVLVLAVLLGRYFSGHSTDDDGNVEFVAGKTKASTAVDGVIKIFTIAVSPSLNYFVHLLLQTFSSLKLNTEPCMQVTIVVVAVPEGLPLAVTLTLAYSMRKMMRDKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGRNKLNPPDDSSKLNPEVLSLINEGIAQNTTGNVFVPKEGGEAEISGSPTEKAILSWAVKLGMNFSLLRSNTTVLHVFPFNSEKKRGGVAVKLEGSGVHIHWKGAAEILLGACTQYLDSDGHLQSIEGEKVAFKEAIDNMAARSLRCVAIAYRSYELDKVPSNEDDLAQWSLPENDLVLLAIVGIKDPCRPGVKEAVELCSKAGVKVRMVTGDNLQTARAIALECGILTSNEEAVEPVIIEGKKFRALSEKEREQIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDSLMRRAPVGRREPLITNVMWRNLVVQAVYQVTVLLVLNFAGESFIPKQETKSLDSQTKNTLIFNAFVLCQIFNEFNARKPEGMNVFQGVTKNRLFMGIVGMTFILQIIIIEFLGKFTTTVKLDWKLWIASLVIGIVSWPLAVAGKLIPVPKTPLSRCLAKPLRRWRRSRAQSQLNTPSTNFSR* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0027 1067 CDD P-type_ATPase_Ca_PMCA-like 117 903 - -
Ahy19g0027 1067 PANTHER CATION TRANSPORTING ATPASE 4 387 - -
Ahy19g0027 1067 PANTHER CATION TRANSPORTING ATPASE 412 1047 - -
Ahy19g0027 1067 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 736 850 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy19g0027 1067 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 407 489 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy19g0027 1067 Gene3D - 187 312 - -
Ahy19g0027 1067 Gene3D - 3 49 - -
Ahy19g0027 1067 Gene3D - 473 670 IPR023299 GO:0000166
Ahy19g0027 1067 SFLD C1.7: P-type atpase like 445 822 - -
Ahy19g0027 1067 Gene3D - 460 815 IPR023214 -
Ahy19g0027 1067 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 412 1033 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Ahy19g0027 1067 Pfam E1-E2 ATPase 212 348 - -
Ahy19g0027 1067 PRINTS P-type cation-transporting ATPase superfamily signature 770 789 - -
Ahy19g0027 1067 PRINTS P-type cation-transporting ATPase superfamily signature 794 806 - -
Ahy19g0027 1067 PRINTS P-type cation-transporting ATPase superfamily signature 259 273 - -
Ahy19g0027 1067 PRINTS P-type cation-transporting ATPase superfamily signature 663 674 - -
Ahy19g0027 1067 PRINTS P-type cation-transporting ATPase superfamily signature 685 695 - -
Ahy19g0027 1067 PRINTS P-type cation-transporting ATPase superfamily signature 463 477 - -
Ahy19g0027 1067 PANTHER CALCIUM-TRANSPORTING ATPASE 4 387 - -
Ahy19g0027 1067 PANTHER CALCIUM-TRANSPORTING ATPASE 412 1047 - -
Ahy19g0027 1067 SUPERFAMILY Calcium ATPase, transduction domain A 213 308 IPR008250 -
Ahy19g0027 1067 SUPERFAMILY Calcium ATPase, transmembrane domain M 92 1033 IPR023298 -
Ahy19g0027 1067 Pfam haloacid dehalogenase-like hydrolase 460 784 - -
Ahy19g0027 1067 ProSitePatterns E1-E2 ATPases phosphorylation site. 465 471 IPR018303 -
Ahy19g0027 1067 Gene3D - 379 1021 - -
Ahy19g0027 1067 SUPERFAMILY HAD-like 461 875 IPR036412 -
Ahy19g0027 1067 Pfam Cation transporter/ATPase, N-terminus 92 160 IPR004014 -
Ahy19g0027 1067 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 470 667 IPR023299 GO:0000166
Ahy19g0027 1067 Pfam Cation transporting ATPase, C-terminus 855 1030 IPR006068 -
Ahy19g0027 1067 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 27 IPR024750 GO:0005516
Ahy19g0027 1067 SFLD p-type atpase 445 822 IPR044492 -
Ahy19g0027 1067 SMART Cation_ATPase_N_a_2 94 165 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0027 Ahy-Chr19 243914 257518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0027 4 1053 Primary Pumps ATPases AT3G21180 73.644 0.0 1560
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0027 19 243914 257518 Ahy19g0027 19 243914 257518 ECH