Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2979 ATGGCAGCTGGGAGAGGCGGTGTTTTGAAGAGGGGGGAATCTTACAAATATGGCTCCATTAAGGAATTTGACTGCAAATATTATAATGATGGTTCTTCTATGGTGGAGGCTTCACCTGCCTCTAGTTCTCATGGTGGTGAAGCTTTGCTTCGGGCAGAGAAGAGGAGGAAAGTTTCTCCTAATGCATGGGACATGGGAGAGAGCGAAGTGAGAGTTTCTTCGAAAAACAGGGTCACCCAGGTTGTTGGTCTGCCTCCTACTACTCCATCTCCGGCTGATTCGTCTTTCGTGCTGCCGGGAGAGCAGTCAGGTGATGGTGATACAGATGCGGATTGCTTCGAGGGAAACAAGGTGCAGGGATGGAACATTGCAATGTCGAGGTGGGCTTCTGCTGATTTTTCACCAGTTGATGCATCTTATGATGAGGACAAGGATGGTAAAGTGAGCTTAACAACTGAAAGTGGTGAGATCCTAGAAGGAAGCTCGGGTGGGAAAGTTAGTAGATCAACTGGGAGTAGTGAAAGAGGTAAGTTTGACCTTTCTTCTGATGATGATACTGACACTGAAGAGGATAATATTGTTGATTCCATTGAGGAGGAGGATGAGGAACAAGGTAAAACTGCTTATAGTTTGGTGTCGGATTCTGATGAAAATCTTGGAGGTTCCAGGAAGGTGCAGAGGAATATAAACATGCTCAACAGTTGCAGAAGTGTGTTTGAGTTTGAAATGATTAAGAAGATAAATGAAGGAACTTATGGCATTGTCTACAAAGCTAAGGATAAGAAGACCGGGGAAATAGTTGCATTGAAGAAGGTGAAGATGAACATAGATAAGGAAGGCTTTCCTTTGACATCCTTGAGGGAAATGAACATTCTTTTGTCGTTTAATCACCCGTCCATTGTAGATGTTAAAGAAGTAGTAGTTGATGATTTTGACGGTGTTTTTATGGTAATGGAGTATATGGAGCACGACCTTAAGGGGCTGATGGATGATATGAAGCAGCCTTTTAGTATAGGTGAAATAAAATCGTTGATGTGGCAACTTCTTCAAGGTGTTGACTATCTTCACGATAATTGGGTTCTTCACAGAGATTTGAAGTCTTCAAACATTCTGCTGAACAAAAAAGGAGAACTGAAAATATGTGATTTTGGATTGTCTCGCCAGTATGGGAGCCCACTGAAGCCGTATACGCCTCTTGTGGTTACTCTACGTTACAGAGCACCCGAGCTTTTGTTAGGTTCTAAAGAATACTCCACAGCAATTGACATGTGGTCTGTGGGTTGCATAATGGCTGAATTAGTTGCCAGAGAGCCTCTTTTCAAGGGTAAAAATGAAGTTGAACAACTTGATCAGATTTTTCGAACTCTGGGTACCCCAGATGAGAATATTTGGCCCGGATTACCCAAATTGCCTGGGTCTAAAGCAAAATTTGTGAGGCAACCGTATAATATGCTCCGGAAGAAGTTCCCAGTCGCATCTTTTACTGGTCAGCCAGTTCTATCAGAGTCAGGATTTGACTTGTTGAGCAGGCTTCTAACTTATGACCCTGAAAAGAGGATAACAGCTAAGGATGCTCTCCTTCATGATTGGTTCCATGAAGCCCCTCTTTCTAATTCTGATTTCAAGCCTATTTCCCCTTTTCGTTGCTAG 1650 0.4303 MAAGRGGVLKRGESYKYGSIKEFDCKYYNDGSSMVEASPASSSHGGEALLRAEKRRKVSPNAWDMGESEVRVSSKNRVTQVVGLPPTTPSPADSSFVLPGEQSGDGDTDADCFEGNKVQGWNIAMSRWASADFSPVDASYDEDKDGKVSLTTESGEILEGSSGGKVSRSTGSSERGKFDLSSDDDTDTEEDNIVDSIEEEDEEQGKTAYSLVSDSDENLGGSRKVQRNINMLNSCRSVFEFEMIKKINEGTYGIVYKAKDKKTGEIVALKKVKMNIDKEGFPLTSLREMNILLSFNHPSIVDVKEVVVDDFDGVFMVMEYMEHDLKGLMDDMKQPFSIGEIKSLMWQLLQGVDYLHDNWVLHRDLKSSNILLNKKGELKICDFGLSRQYGSPLKPYTPLVVTLRYRAPELLLGSKEYSTAIDMWSVGCIMAELVAREPLFKGKNEVEQLDQIFRTLGTPDENIWPGLPKLPGSKAKFVRQPYNMLRKKFPVASFTGQPVLSESGFDLLSRLLTYDPEKRITAKDALLHDWFHEAPLSNSDFKPISPFRC* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2979 549 ProSiteProfiles Protein kinase domain profile. 241 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2979 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672|GO:0006468
Ahy18g2979 549 MobiDBLite consensus disorder prediction 151 190 - -
Ahy18g2979 549 SMART serkin_6 241 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2979 549 MobiDBLite consensus disorder prediction 154 176 - -
Ahy18g2979 549 Gene3D Transferase(Phosphotransferase) domain 1 323 543 - -
Ahy18g2979 549 CDD STKc_CDC2L1 235 531 IPR045267 GO:0004674|GO:0005524|GO:0006468
Ahy18g2979 549 Pfam Protein kinase domain 241 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2979 549 Gene3D Phosphorylase Kinase; domain 1 223 322 - -
Ahy18g2979 549 PANTHER CYCLIN-DEPENDENT KINASE 107 546 - -
Ahy18g2979 549 MobiDBLite consensus disorder prediction 34 53 - -
Ahy18g2979 549 PANTHER CELL DIVISION PROTEIN KINASE 107 546 - -
Ahy18g2979 549 SUPERFAMILY Protein kinase-like (PK-like) 237 535 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2979 Ahy-Chr18 134922617 134926884 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2979 236 536 Core Cell Cycle Gene Families AT5G10270 46.057 2.86e-84 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Ahy18g2979 Pkinase 1.70E-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2979 K08818 - gmx:100788840 638.647