Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2978 ATGGGGTCCTTCCAAGACTTGGTTCTTGTGCTGTTATGTTCAGTTTGGTGTGTCTTTCATGTTGTTAATTGCAATGCTCAGCAGTTACAATCTTCTCAAACACTTGTGCTTCTTCAACTGAAAAAGCACTTAGAATATCCAAAGCCATTGGATATTTGGAAAGATCGTTGGACAAATCTTTGTTCTTCAACACAACAAGTGAATGTTTCATGCAATGAGAACTTTGTCACTGAACTTCTGATTATTGGTGACAAGACACAAAGCAAATTTAGAGAAGAACATGAAGGATTTGATGGTTATGCAATTCAAGATCAAACACTTTCACAAGGGTTTTCAATGGATTCTTTTGTTGCTACTTTAGCAAGGTTAACTAACCTTAGAGTTCTGAAGCTTGTTTCTTTGGGAATTTGGGGTCCATTACCTGATAGGATTCATAGGCTTTATGATCTTCAACACTTGGATTTGAGTTCCAATTTTCTCTATGGATCAATCCCTCCAAAGATTTCAACAATGGTGAATCTCAAAACTCTTAATTTGGGTGATAACTTCTTCAATGGTACTATTCCAACCTTGTTCTTCAACTCATCAAGTAATTTATCATATCTCAGTTTGAAGAACAACAAGTTGAAGGGTCATTTTCCAAATTCAATTCTTGGCATCAACACCCTCAATGAGATTGATATTTCAAACAACAATATTTCTGGTGGATTGCAAGATTTCAATGGTTTGAGCAACTTGGAACACTTGGATTTGAGTTGGAACAACTTGGATTCAACACTTCCTCCAATGCCAAAAGGATTGAAGAATCTTTTCCTAAGCAGGAACTCATTCTCAGGTGAAATTCCAAAGCAATATGGTAAACTAAGTATGCTTCAAATGCTTGATGTTTCATCCAATTCACTCATAGGAACTGTTCCTGCTGAAATTTTCAACTTGCCAAACATAAGTCTCTTGAACATTTCATCAAACATGTTGAGTGGAACCACAAAGAACAATCTAAGATGTAGCATTCGACTTCGATTCGTCGACGTCTCGAATAACAGGCTAATGGGGGGCTTGCCTGATTGCCTGATCCGAACCGGACCCGAAAATGATAGAGTTGTTAAGAGTGATGGAAATTGTTTGTCTGGGAATTTTCAGCATCAACATGCATTGTCATATTGCAAAGAAGTTCCTCAATTGAAGAAGGAATCACATAAAGTTGGAGCATTATTTGTTGTTGGTGTAATTGTTGGAATTCTTGTTATGGTTATGGTTTTTGTTTTGTGCATTGTTATAGTTTGTAAAAGGTATTATTCAAAAGGGGTATCAGAACAGCACCTATTGCATAAATCAGTTCAAGATAGCTACTCAGCAAGTTTGTCATCTGAAATTGTGACAAATGCAAGGTATGTTTCTGAAGCTGCAAAGTTTGGCAGAGAAGGCCTTCCCTTGTGTAGGTCATATTCTTTGGAAGAGTTGAAGGAAGCTACAAATAACTTTGACAACCCTAATTTTATGGGTGAAAATTTATATGGGAAGCTTTACAGAGGAAAATTAGAGAGTGGAATACAAGTTGTGATAAGGTGTTTGCCTTTGTCAAAAAAATACACAATTAGGAACTTCAAACTCAGGTTGGATTTGCTTGCAAAGCTTAGGCACCCTCATTTAGTGTCTCTCTTGGGACATTGCATTGATGGTGTTGTTGGAGATCAAAGTGACACAAATGTCTTCCTTGTTTATGAATTTGTCTCAAATGGGAGCTTTCAGACCTATCTCTCAGAAGACAGTGGTGGAAAGATTTATGATTGGTCAGAGAGATTATCGGTGCTAATTAGTATTGCCAAGGCTGTTCACTTCTTACACACTGGAATGATACCCGGCTTCTTTAAGAACAGACTTAAGACTAATAATATATTGATTAATGAACATTGGATGGCAAAGTTGAGTGACTATGGATTGTCTATTATCTCTGAAGAAACTGATGCTTGTGGGGTAAATGGAGAAAGTCCTGATTCAATGCAAATGAAAAGGTTAGAGGATGATGTCTATAGCTTTGGATTCATAATACTTGAGGCACTTGTTGGACCTTCACTATCTGCTAAAAGAGAAGCACTTATGCTCCATGAAAGGGGATCATTCAATAGTCAAGATGGGTGGAAACAGATTGTGGATCCAATAGTGATGTCAACTTGTTCTAAAGAATCTCTATCCATTGTGATATCTATATCCAACAAATGCATTTCTCCTGAGTCATGGAGCAGACCATCCATTGAAGATGTCCTTTGGAACTTGCAATATGCTTCTCAAGTTCAGGCAACTGCTGATGGGGTTTAG 2316 0.3739 MGSFQDLVLVLLCSVWCVFHVVNCNAQQLQSSQTLVLLQLKKHLEYPKPLDIWKDRWTNLCSSTQQVNVSCNENFVTELLIIGDKTQSKFREEHEGFDGYAIQDQTLSQGFSMDSFVATLARLTNLRVLKLVSLGIWGPLPDRIHRLYDLQHLDLSSNFLYGSIPPKISTMVNLKTLNLGDNFFNGTIPTLFFNSSSNLSYLSLKNNKLKGHFPNSILGINTLNEIDISNNNISGGLQDFNGLSNLEHLDLSWNNLDSTLPPMPKGLKNLFLSRNSFSGEIPKQYGKLSMLQMLDVSSNSLIGTVPAEIFNLPNISLLNISSNMLSGTTKNNLRCSIRLRFVDVSNNRLMGGLPDCLIRTGPENDRVVKSDGNCLSGNFQHQHALSYCKEVPQLKKESHKVGALFVVGVIVGILVMVMVFVLCIVIVCKRYYSKGVSEQHLLHKSVQDSYSASLSSEIVTNARYVSEAAKFGREGLPLCRSYSLEELKEATNNFDNPNFMGENLYGKLYRGKLESGIQVVIRCLPLSKKYTIRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGDQSDTNVFLVYEFVSNGSFQTYLSEDSGGKIYDWSERLSVLISIAKAVHFLHTGMIPGFFKNRLKTNNILINEHWMAKLSDYGLSIISEETDACGVNGESPDSMQMKRLEDDVYSFGFIILEALVGPSLSAKREALMLHERGSFNSQDGWKQIVDPIVMSTCSKESLSIVISISNKCISPESWSRPSIEDVLWNLQYASQVQATADGV* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2978 771 PANTHER BNAA09G06560D PROTEIN 8 770 - -
Ahy18g2978 771 Gene3D Phosphorylase Kinase; domain 1 456 576 - -
Ahy18g2978 771 ProSiteProfiles Protein kinase domain profile. 494 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2978 771 SUPERFAMILY L domain-like 32 359 - -
Ahy18g2978 771 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Ahy18g2978 771 Pfam Protein tyrosine and serine/threonine kinase 500 753 IPR001245 GO:0004672|GO:0006468
Ahy18g2978 771 Gene3D Ribonuclease Inhibitor 267 360 IPR032675 -
Ahy18g2978 771 PANTHER OS07G0166700 PROTEIN 8 770 IPR045272 GO:0004714|GO:0006468
Ahy18g2978 771 Gene3D Ribonuclease Inhibitor 30 266 IPR032675 -
Ahy18g2978 771 Gene3D Transferase(Phosphotransferase) domain 1 577 769 - -
Ahy18g2978 771 SUPERFAMILY Protein kinase-like (PK-like) 477 759 IPR011009 -
Ahy18g2978 771 SMART LRR_typ_2 243 266 IPR003591 -
Ahy18g2978 771 SMART LRR_typ_2 147 171 IPR003591 -
Ahy18g2978 771 SMART LRR_typ_2 288 312 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2978 Ahy-Chr18 134881953 134890333 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2978 8 703 Miscellaneous Gene Families AT5G14210 48.798 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Ahy18g2978 PK_Tyr_Ser-Thr 6.60E-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2978 - - adu:107463496 1380.93