Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2976 ATGGCCAACAGCCAAACACGCCCTAACTCCACCACCGTAGATCCAAACAGTGGTTTCAACCCACATTCCAGAACCTTCCACAGCCTCCGCCCTAACGTCCCCCTCCCTCCGCCCTCTCAGCCTCTCTCAATCACCGAATACGCACTCTCTCTCATCCCCTCCGCCGCCACCTCCACCGACGGCGCAACTACTGCTCTCATCGACGCCGCCGCGGACATCCGCCTCTCCTACCCTCTCCTCCTCCGCCGCATAAAATCCCTCTCAATCTCCCTCCAATCCTTCACACCACTCAAAAAAGGACACGTGGCACTCATACTCACCCCTCCTTCCGTACACGTTCCCGTTCTCTATTTTTCCCTCTTATCCCTCGGAATCGTTATTTCTCCCGCCAACCCTCTCAGCTCCCCGGCCGAGTTAACTCACCTCATCCAACTCGTGAACCCTGAAATCGCCTTCACAACTTCCAAAACTGCCGCTAAAATCCCCAAACTACCCCTCGGCCCCATCCTCCTCGACTCGCCGGAGTTCCTCTCCATGCTCGAGAACAACGAGTCAGTAACTAGCGAACTCGAACGAGTCGAGGTGAGTCAGTCAGAGCCAGCAGCGATTCTCTTCTCTTCCGGAACCACGGGAAGAGTGAAAGGGGTTCTCCTCACACACGGGAACCTCATCGCTCTAATTGGAGGGTTCTGCCACCTGAAACACATGACGGAGGCGCCAGAAGAGTCACCGGAGGAGGAGAACTGGGTGGCACTGGTGACGGTGCCGTTGTTCCACGTGTTCGGGTTCTTCATGCTGATAAGAGGCTTAGCGATGGGTGAAACGATGGTTCTAATGGAGAGGTTCGATTTCGAAGGGATGCTGAGGGCGGTGGAGAAATACAAGGTGAATTACATGCCAGTGTCGCCGCCGCTGGTGGTGGCGCTGACGAAGTCGGAGGTGGCAAGAAAGTATGATCTGAGTTCGTTGCGGTTGTTAGGGTCCGGTGGAGCTCCGCTGGGAAAAGAGGTGGCGGAGAGTTTCGGTGCTAAGTTCCCCAACGTGGAAATTGTGGAGGGGTATGGTCTAACTGAAAGTTCAGGAGGAGCAGCAAGGATGATAGGAACTGATGAGGCGAAACGACATGGTTCTGTTGGTCGATTAGCTGAGCAAATGGAGGCTAAGATAGTTGATCCTATCACCGGCGAATCGTTGCCTCCAGGCCGCCGAGGAGAGCTATGGTTGCGTGGACCAACAATCATGAAAGGTTATGTGGGAGATGAAGATGCCACTGCTCAAACATTAGATTCAGAGGGATGGTTGAAGACTGGTGATCTTTGTTATTTTGATTCTGATGGTTATCTCTACATTGTGGATAGACTCAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAAAATATACTTCATAACAATCCTGAAATTGCTGATGCTGCTGTAGTACCGTATCCTGATGAAGAAGCAGGGCAAATTCCAATGGCATTTGTTGTAAGAAAGCCAGGAAGCAGCATCAATGCAGCTGAGGTCATGGAGTTTGTGGCAAAGCAGGTTTCACCATACAAGAAGATACGGCGTGTTTCTTTTATTAACTCTATACCAAAATCTCCGGCTGGTAAAATTTTGAGAAGACAATTGGTTGATCTTGCTCTAACAAGTGGTTCTTCCAAGTTGTGA 1689 0.5121 MANSQTRPNSTTVDPNSGFNPHSRTFHSLRPNVPLPPPSQPLSITEYALSLIPSAATSTDGATTALIDAAADIRLSYPLLLRRIKSLSISLQSFTPLKKGHVALILTPPSVHVPVLYFSLLSLGIVISPANPLSSPAELTHLIQLVNPEIAFTTSKTAAKIPKLPLGPILLDSPEFLSMLENNESVTSELERVEVSQSEPAAILFSSGTTGRVKGVLLTHGNLIALIGGFCHLKHMTEAPEESPEEENWVALVTVPLFHVFGFFMLIRGLAMGETMVLMERFDFEGMLRAVEKYKVNYMPVSPPLVVALTKSEVARKYDLSSLRLLGSGGAPLGKEVAESFGAKFPNVEIVEGYGLTESSGGAARMIGTDEAKRHGSVGRLAEQMEAKIVDPITGESLPPGRRGELWLRGPTIMKGYVGDEDATAQTLDSEGWLKTGDLCYFDSDGYLYIVDRLKELIKYKAYQVPPAELENILHNNPEIADAAVVPYPDEEAGQIPMAFVVRKPGSSINAAEVMEFVAKQVSPYKKIRRVSFINSIPKSPAGKILRRQLVDLALTSGSSKL* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2976 562 Gene3D - 456 556 IPR045851 -
Ahy18g2976 562 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 26 551 - -
Ahy18g2976 562 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Ahy18g2976 562 Pfam AMP-binding enzyme 62 460 IPR000873 -
Ahy18g2976 562 Gene3D - 39 455 IPR042099 -
Ahy18g2976 562 SUPERFAMILY Acetyl-CoA synthetase-like 59 555 - -
Ahy18g2976 562 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 26 551 - -
Ahy18g2976 562 MobiDBLite consensus disorder prediction 1 32 - -
Ahy18g2976 562 MobiDBLite consensus disorder prediction 1 27 - -
Ahy18g2976 562 CDD 4CL 49 550 - -
Ahy18g2976 562 Pfam AMP-binding enzyme C-terminal domain 469 544 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2976 Ahy-Chr18 134847171 134854011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2976 9 562 Monolignol Biosynthesis Gene Families AT5G63380 59.253 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2976 K01904 - gmx:100804044 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2976 18 134847171 134854011 Ahy18g2976 18 134847171 134854011 ECH
Ahy18g2976 18 134847171 134854011 Ahy8g2725 8 50725428 50731572 hybridization