Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2974 ATGGTTGATTTGGAAATCCAGGTCCCAACCCCCTTCGACCCTTTCGCCGAGGCCAAAGAATCGGATGCCCCCGGGGCAAAGGAGTATGTCCATATCCGCATCCAGCAAAGGAATGGGAAGAAGAGCCTGACCACAGTGCAAGGGCTGAAGAAGGAGTTCAGCTACGAGAAAATCCTCAAAGACCTTAAGAAAGAGTTCTGCTGCAACGGCAATGTCGTTCAGGACAAAGAGCTTGGCAAAATAATACAGCTCCAAGGGGATCAGCGCAAGAACGTTTCTCAGTTTCTGGTTCAGGTTGGTTTGGTGAGGAAGGACCAAATCAAGATTCATGGTTTTTGA 339 0.4897 MVDLEIQVPTPFDPFAEAKESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQVGLVRKDQIKIHGF* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2974 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Ahy18g2974 112 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 5 112 IPR005874 GO:0003743
Ahy18g2974 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - -
Ahy18g2974 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Ahy18g2974 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Ahy18g2974 112 Gene3D - 1 112 - -
Ahy18g2974 112 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 1 112 - -
Ahy18g2974 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Ahy18g2974 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2974 Ahy-Chr18 134838973 134840514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2974 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 84.821 8.38e-70 202