Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2973 ATGGGGTCCTTCCAAGACTTGGTTCTTGTGCTGTTATGTTCAGTTTGGTGTGTCTTTCATGTTGTTAATTGCAATGCTCAGCAGTTACAATCTTCTCAAACACTTGTGCTTCTTCAACTGAAAAAGCACTTAGAATATCCAAAGCCATTGGATATTTGGAAAGATCGTTGGACAAATCTTTGTTCTTCAACACAACAAGTGAATGTTTCATGCAATGAGAACTTTGTCACTGAACTTCTGATTATTGGTGACAAGACACAAAGCAAATTTAGAGAAGAACATGAAGGATTTGATGGTTATGCAATTCAAGATCAAACACTTTCACAAGGGTTTTCAATGGATTCTTTTGTTGCTACTTTAGCAAGGTTAACTAACCTTAGAGTTCTGAAGCTTGTTTCTTTGGGAATTTGGGGTCCATTACCTGATAGGATTCATAGGCTTTATGATCTTCAACACTTGGATTTGAGTTCCAATTTTCTCTATGGATCAATCCCTCCAAAGATTTCAACAATGGTGAATCTCAAAACTCTTAATTTGGGTGATAACTTCTTCAATGGTACTATTCCAACCTTGTTCTTCAACTCATCAAGTAATTTATCATATCTCAGTTTGAAGAACAACAAGTTGAAGGGTCATTTTCCAAATTCAATTCTTGGCATCAACACCCTCAATGAGATTGATATTTCAAACAACAATATTTCTGGTGGATTGCAAGATTTCAATGGTTTGAGCAACTTGGAACACTTGGATTTGAGTTGGAACAACTTGGATTCAACACTTCCTCCAATGCCAAAAGGATTGAAGAATCTTTTCCTAAGCAGGAACTCATTCTCAGGGTATGTTTCTGAAGCTGCAAAGTTTGGCAGAGAAGGCCTTCCCTTGTGTAGGTCATATTCTTTGGAAGAGTTGAAGGAAGCTACAAATAACTTTGACAACCCTAATTTTATGGGTGAAAATTTATATGGGAAGCTTTACAGAGGAAAATTAGAGAGTGGAATACAAGTTGTGATAAGGTGTTTGCCTTTGTCAAAAAAATACACAATTAGGAACTTCAAACTCAGGTTGGATTTGCTTGCAAAGCTTAGGCACCCTCATTTAGTGTCTCTCTTGGGACATTGCATTGATGGTGTTGTTGGAGATCAAAGTGACACAAATGTCTTCCTTGTTTATGAATTTGTCTCAAATGGGAGCTTTCAGACCTATCTCTCAGAAGACAGTGGTGGAAAGATTTATGATTGGTCAGAGAGATTATCGGTGCTAATTAGTATTGCCAAGGCTGTTCACTTCTTACACACTGGAATGATACCCGGCTTCTTTAAGAACAGACTTAAGACTAATAATATATTGATTAATGAACATTGGATGGCAAAGTTGAGTGACTATGGATTGTCTATTATCTCTGAAGAAACTGATGCTTGTGGGGTAAATGGAGAAAGTCCTGATTCAATGCAAATGAAAAGGTTAGAGGATGATGTCTATAGCTTTGGATTCATAATACTTGAGGCACTTGTTGGACCTTCACTATCTGCTAAAAGAGAAGCACTTATGCTCCATGAAAGGGGATCATTCAATAGTCAAGATGGGTGGAAACAGATTGTGGATCCAATAGTGATGTCAACTTGTTCTAAAGAATCTCTATCCATTGTGATATCTATATCCAACAAATGCATTTCTCCTGAGTCATGGAGCAGACCATCCATTGAAGATGTCCTTTGGAACTTGCAATATGCTTCTCAAGTTCAGGCAACTGCTGATGGGGTTTAG 1764 0.3753 MGSFQDLVLVLLCSVWCVFHVVNCNAQQLQSSQTLVLLQLKKHLEYPKPLDIWKDRWTNLCSSTQQVNVSCNENFVTELLIIGDKTQSKFREEHEGFDGYAIQDQTLSQGFSMDSFVATLARLTNLRVLKLVSLGIWGPLPDRIHRLYDLQHLDLSSNFLYGSIPPKISTMVNLKTLNLGDNFFNGTIPTLFFNSSSNLSYLSLKNNKLKGHFPNSILGINTLNEIDISNNNISGGLQDFNGLSNLEHLDLSWNNLDSTLPPMPKGLKNLFLSRNSFSGYVSEAAKFGREGLPLCRSYSLEELKEATNNFDNPNFMGENLYGKLYRGKLESGIQVVIRCLPLSKKYTIRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGDQSDTNVFLVYEFVSNGSFQTYLSEDSGGKIYDWSERLSVLISIAKAVHFLHTGMIPGFFKNRLKTNNILINEHWMAKLSDYGLSIISEETDACGVNGESPDSMQMKRLEDDVYSFGFIILEALVGPSLSAKREALMLHERGSFNSQDGWKQIVDPIVMSTCSKESLSIVISISNKCISPESWSRPSIEDVLWNLQYASQVQATADGV* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2973 587 Gene3D Ribonuclease Inhibitor 219 284 IPR032675 -
Ahy18g2973 587 Gene3D Phosphorylase Kinase; domain 1 285 392 - -
Ahy18g2973 587 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Ahy18g2973 587 Pfam Protein tyrosine and serine/threonine kinase 316 569 IPR001245 GO:0004672|GO:0006468
Ahy18g2973 587 ProSiteProfiles Protein kinase domain profile. 310 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2973 587 PANTHER OS07G0166700 PROTEIN 279 586 IPR045272 GO:0004714|GO:0006468
Ahy18g2973 587 PANTHER OS07G0166700 PROTEIN 8 278 IPR045272 GO:0004714|GO:0006468
Ahy18g2973 587 PANTHER BNAA09G06560D PROTEIN 279 586 - -
Ahy18g2973 587 PANTHER BNAA09G06560D PROTEIN 8 278 - -
Ahy18g2973 587 Gene3D Transferase(Phosphotransferase) domain 1 393 585 - -
Ahy18g2973 587 SUPERFAMILY L domain-like 32 282 - -
Ahy18g2973 587 Gene3D Ribonuclease Inhibitor 30 217 IPR032675 -
Ahy18g2973 587 Pfam Leucine Rich Repeat 150 165 IPR001611 GO:0005515
Ahy18g2973 587 SUPERFAMILY Protein kinase-like (PK-like) 293 575 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2973 Ahy-Chr18 134821055 134829422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2973 280 586 Miscellaneous Gene Families AT5G63410 62.136 5.14e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Ahy18g2973 PK_Tyr_Ser-Thr 3.70E-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2973 - - adu:107463496 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2973 18 134821055 134829422 Ahy18g2973 18 134821055 134829422 ECH
Ahy18g2973 18 134821055 134829422 Ahy8g2722 8 50700821 50708030 hybridization