Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2971 ATGGCTTCTTCTACTTCTTTTGCTTCTCTCTTACTCCCTCTTTACAACCCCGCTTTCCGACCAAAACCAACAACTTCTCTTCCCGCTTTTCGCTCCATTCACTCTTCTGTGCTCCCAGCTACTGATGGATCTCAAGCACCGCACAAGAGAACAAGAAGAATGGAAGGTCCTCGGAAAAGCATGGAAGATTCAGTTCAGCGCAAAATGGAGCAGTTTTATGAAGGGAAAGATGGGCCACCTCTCCGTGTTCTTCCGATTGGTGGGCTGGGTGAAATTGGGATGAACTGCATGCTGGTTGGGAACCATGATCGCTATATCCTCATTGATGCCGGAGTTATGTTTCCAGACTATGATGAACTTGGAGTCCAAAAGATCATACCTGATACAACATTTATAAGAAAATGGAGCCACAAAATTGAAGCACTTGTTATAACGCATGGTCATGAGGATCACATTGGAGCGTTGCCTTGGGTCATTCCAGCATTGGATTCCAATACACCAATTTTCGCATCTTCCTTTACAATGGAGCTTATAAAAAAGCGTCTGAAGGAGCATGGTATTTTTCTTCCATCTAGACTCAAGATATTTAGAACAAGAAAGAAGTTTATGGCTGGGCCATTTGAGATAGAACCTATCAGGGTGACCCATTCTATTCCTGATTGTTGTGGATTGGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATCGACGAGACACCTCTGGACGGGAAAGTTTTTGATCGCGAGGCTTTAGAGGAACTCTCTAAAGAAGGAGTAACACTGATGATGAGTGATTCAACCAATGTACTCTCACCTGGAAGGACAATAAGTGAATCTGTTGTTAAAGATGCATTATTGAGGCATATTTCAGCTTCTAAAGGAAGGGTTATTACCACCCAATTTGCATCAAATCTGCATCGGCTTGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCCGAAAGTTGGTATTCGTTGGCATGTCTTTGAGGACATATTTAGATGCAGCTTGGAAGGATGGAAAGGCTCCAATTGATCCCTCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGATCTCAAGCAGAACCACGTGCTGCCTTGAATCTTGCATCATATGGAAGTAGTCATGCTTTCAAACTAACCAAGGAAGATATTGTTTTGTATTCGGCCAAGGTTATCCCTGGTAATGAGTCTCGTGTGATGAAAATGCTGAACCGCATATCAGAGATTGGATCAACAATAATAATGGGTAAAAATGAAGGTCTCCACACATCTGGTCATGCTTATCGTGGGGAATTGGAGGAAGTACTTCGAATTGTGAAGCCGCAACATTTTCTTCCCATACATGGAGAACTCTTGTTTTTGAAGGAGCATGAATTACTTGGAAAATCAAATGGCATTCGGCACACTGCTGTTATTAAAAATGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGGAGAGTCCTTTCTAATGGTTTCATTTCCCTTGGAAGAGAGAATTTACAGTTGAAGTACAGTGATGGTGACAAAGCATTTGGTACATCAAGCGACCTCTTCATTGATGAAAGATTGAAAATTGCATTAGATGGCATCATCGTGGTTAGCATGGAAGTTTTTCGCCCCCAAAGAGCAGACAGTTTGGCTGAAAACACCTTAAAAGGGAAGATAAGGATTACGACAAGATGCCTATGGCTTGACAAGGGAAAGTTATTGGATGCACTGCATAAAGCTGCTCATGCTGCTCTTTCAAGCTGCCCTGTAAAGTGTCCACTGGCTCACATGGAAAGAACAGTGGCCGAGGTCTTGAGGAAGATGGTGAGGAAGTACAGTGGTAAACGGCCTGAAGTTATTGCTATTGCCATAGAAAATCCAGCTGCTGTTCTTGCTGAGGAGATAAACACAAAGTTATCTGGCAAGTCACATGTGGATCATGGAACATCAACATTAAGAAAAATAGTCGATGGGCACAGGAAGGAAAATCAGCCAGACACAACGCAAATAAGAGACGATGTCAATGATGTTGAAGGACTTCTACCTGAGGAAGACACTGGTCCACCAACCGAAGAAGCCGAGGGTGATTTATCGGATTCAGAGGAATTTTGGAAGCCATTTATTGCATCCTCACCGGTTGAGAAGTCAATCAAAGCTAACAACGGTTATGTTCCACGAAAGGAGCACAAGTCTAATCTTAAGAAAGATGATTCCGAAGACATTAGTGAAGCCAACTTTGTGAAAGCATCCAGTTCTGAACTCAAGTCGTCGAAGTCAGGGAAGAGGAATAAATGGAAACCTGAAGAAATTAAGAAGTTGATCGACATGCGCGGGAAACTGCACGATAGATTTCAAATTGTGAAGGGAAGGATGGCTTTATGGGAAGAGATATCTCAGAGCTTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAGTGTAAATCGCTTTGGACATCTTTGGTACAGAAATATCAGGAGATTAAGAACGAGAAGGGTAGTAGCAAGAGTAGTTGGCAATATCTTGAGGACATGGAAAAGATAATGCCTGATAGTAAAGCAATGGCAACAAAATGA 2616 0.4266 MASSTSFASLLLPLYNPAFRPKPTTSLPAFRSIHSSVLPATDGSQAPHKRTRRMEGPRKSMEDSVQRKMEQFYEGKDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFLPSRLKIFRTRKKFMAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTISESVVKDALLRHISASKGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDIVLYSAKVIPGNESRVMKMLNRISEIGSTIIMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSNGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGRENLQLKYSDGDKAFGTSSDLFIDERLKIALDGIIVVSMEVFRPQRADSLAENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPVKCPLAHMERTVAEVLRKMVRKYSGKRPEVIAIAIENPAAVLAEEINTKLSGKSHVDHGTSTLRKIVDGHRKENQPDTTQIRDDVNDVEGLLPEEDTGPPTEEAEGDLSDSEEFWKPFIASSPVEKSIKANNGYVPRKEHKSNLKKDDSEDISEANFVKASSSELKSSKSGKRNKWKPEEIKKLIDMRGKLHDRFQIVKGRMALWEEISQSLLADGISRSPGQCKSLWTSLVQKYQEIKNEKGSSKSSWQYLEDMEKIMPDSKAMATK* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2971 871 SUPERFAMILY Metallo-hydrolase/oxidoreductase 81 495 IPR036866 -
Ahy18g2971 871 MobiDBLite consensus disorder prediction 655 715 - -
Ahy18g2971 871 Pfam Myb/SANT-like DNA-binding domain 776 861 IPR044822 -
Ahy18g2971 871 PANTHER RIBONUCLEASE J 11 871 - -
Ahy18g2971 871 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 11 871 - -
Ahy18g2971 871 CDD GT1 777 842 - -
Ahy18g2971 871 Gene3D - 85 497 IPR036866 -
Ahy18g2971 871 MobiDBLite consensus disorder prediction 46 64 - -
Ahy18g2971 871 SMART Lactamase_B_5a 93 293 IPR001279 -
Ahy18g2971 871 MobiDBLite consensus disorder prediction 38 64 - -
Ahy18g2971 871 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 438 474 IPR011108 -
Ahy18g2971 871 MobiDBLite consensus disorder prediction 735 754 - -
Ahy18g2971 871 Pfam Beta-lactamase superfamily domain 104 240 IPR001279 -
Ahy18g2971 871 MobiDBLite consensus disorder prediction 661 691 - -
Ahy18g2971 871 ProSiteProfiles Myb-like domain profile. 771 835 IPR001005 -
Ahy18g2971 871 MobiDBLite consensus disorder prediction 733 754 - -
Ahy18g2971 871 Gene3D - 779 840 - -
Ahy18g2971 871 CDD RNaseJ_MBL-fold 84 495 - -
Ahy18g2971 871 Gene3D - 282 432 IPR042173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2971 Ahy-Chr18 134799342 134806952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2971 778 862 Trihelix Transcription Factor Family AT2G38250 33.721 4.06e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy18g2971 Lactamase_B_2 9.10E-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2971 - - gmx:100783850 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2971 18 134799342 134806952 Ahy8g2720 8 50681453 50689142 hybridization
Ahy11g1559 11 72984593 72993252 Ahy18g2971 18 134799342 134806952 PCT
Ahy18g2971 18 134799342 134806952 Ahy11g1559 11 72984593 72993252 PCT