Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2952 ATGGGAAACCAAAATAGTACTCATCAACATCAAATAGAGATTGAGAACTTATGGTCCTTCCAACGCCGCGAGGTGGAACAGGCCAGCGACTTCAAAAGCGGCCTGTTCTCCCTCGATCGCGTTAGGAAGATGATGAAGGTCGAAGAAGACGTTGATCGGATCTCGGCCGAGGTGCCGGTTGTCTTGGCCAAGGCATGTGATCTCTTCATCCTTCTATCTGCGCTTCCTTCCGACAGTTCCATCACTACAGAAAAAATGGAGAATAGCGGCGGCAAATTGTCTGCGGTTTCTCCCTCTGCTGCAATTTGCCAAGATAGCTGCGATTGGCATCCGATCTCTTCAATGTGA 348 0.4943 MGNQNSTHQHQIEIENLWSFQRREVEQASDFKSGLFSLDRVRKMMKVEEDVDRISAEVPVVLAKACDLFILLSALPSDSSITTEKMENSGGKLSAVSPSAAICQDSCDWHPISSM* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2952 115 Gene3D Histone, subunit A 1 95 IPR009072 GO:0046982
Ahy18g2952 115 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED 4 71 - -
Ahy18g2952 115 SUPERFAMILY Histone-fold 21 71 IPR009072 GO:0046982
Ahy18g2952 115 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 39 70 IPR003958 -
Ahy18g2952 115 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2952 Ahy-Chr18 134577317 134578621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2952 17 71 CCAAT-HAP5 Transcription Factor Family AT5G63470 54.545 6.68e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2952 - K08066 adu:107463451 129.413