LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy18g2949	ATGGAATGTAATAAAGACGACGCCATAAAGGCTAAAGAGCTTGCCGAGAAGACGCTACTTGAGAGGGACCTAAGCAGTGCAAAGATATTTGCAAAGAAGGCGCAAGACATGTATCCTAATCTTGATGGCCTTCGTCAATTGCTGGCCACTATTGAGGTGTATGCTTCGGCTGAAAAAAAGGTTAATGGTGAAGTTGATTGGTACAGGGTCCTTGGTGTTGAACCAATGGCAGATGACCAAACAATTCGAAGACATTACAGGAAACTGGCTCTTATTCTGCACCCTGATAAAAATAAATCGGTAGGGGCAGACGAGGCATTTAATCTTATCACACAGGCATGGACTTGTTTGTCTGATAATGCCAAGAGAGTCGAGTATGACCAAAAGCGCAACTTCTCTGGCATATATTGTGGGAAACCATCTGCACCAGCTCGTCCGAGTGGTTTCTTTGGTAACTTAAATGCTGCTAACTGGAAGAATAGAGATCAAGGGAGTGCTACACATCAAACTCAAACTACAAGACCTCCCACGTCAATGAACCCGACATTTTGGACCATGTGCTTGTCCTGCAGGACAAAGTTTGAGTACAATGCTCATTTTGTCAACTGCAAACTTACCTGCTTCAACTGCAACAAGACCTTTGTAGCTTCTGAGGCATCGCCCCCACGTGTATATAGAAATGCTTCATCTACTTCAAGCATTTCTCAGATGAACCAAAATAACCTTAACAGAATGAGAGCAAACTGTCATGTTTTGGGAAAGGTACCAATTCCTGCTGTCAACTCATCATTCGGGTCAGGTTCTCTCTTCATGCCTGGTGGCATTTCGAGAATGCCGTCATTTTCTACTGCTGCTGAAACTCCTGGTGTTTTCAAAGTTCCATCTGATACTTTGAAGAGGGCATGCGAAGCTTCAACACCCGACAATGCCCTTGCTGCTGAGAAAACTGGTGTTGCAGGTTCAACATTTCATTCCTGTTCATTTGGTTCAAATTCTTCTCTGAAAGGAGATGGGCCAAGGAAAAAAATCCGCACAAGTGAATTCAAAGTAAACAGTGATAGGAAATATACACAAAATGGGGTAGCTTCTCGACACGAAGGAGTAAGCTTGGCAAATGAACTTGGGTCTGAAAAGGATAATTCTGAAACCGGAAGGATGAGTGCTGCTGGAAACTACAAACGTAATGTTTTTTGGGAAATACCACAACAGAAAATGAAGAAGATTCTAATGGAGAAGGCGAGAAAGGAAATTCAGAAAAAGCTTGAAGAATGGAATGTTGCTTCTGAAGCAAGGAATTTGGAAAAGTCAAAGTATGCTGCTACAGAGATCATAGAGAAGGACAAGAAAAAGGCGAAAGATGTCATAGAGAAGGAGAACAAAAAGATTACATATGCTGTAAAACCTGACACGAAAAATGCTATTCGTGGTGCAAAACCTGGTGCACAAGGAATTGTTGCTTCTGATAAAATTGGCAAAAAACATATCCCTCCTGCTGATCCAGTTGTGGCTGATTATACAGTCTTGATGAGTGTTCCAGACCCGGACTTCCATGATTTCGATGGGGACCGTATTGAAAATGCTTTTGGCGCAAACCAGGTGTGGGCTGTTTATGATGAGGACGATGGCATGCCACGCTACTATGCTTTGATTCACGATGTGATCTCAAAGAAACCGTTCAACATGAGAATTAGCTGGCTTAACTCGAAGACAAACGATGAATTGGCTCCAATAGAGTGGGTTAGTTCTGGCTTTCCCAAGACCTCTGGGGATTTCAGAATAAGCAAGCATGTTGTCTATAACAGTCTTAACTCCTTTTCGCACAAGGTTCAATGGACAAAAGGTGCAAGAGGGATTGTGCATATATATCCCAAGAAGGGGGATGTTTGGGCCTTGTATCGGAACTGGTCTGCTGACTGGAACCAATTTACCAAAGACGAAGTCATTCATAAGTATGACATGGTGGAAGTGCTGGAAGACTACAATGAGAAGCAAGGTGTGAATGTTGCTCCACTTGGTAAAGTTCAGGGTTTCAAGACAGTGTTTTGCCGGAACAGGGATCCAAGGAGAATAAAAAACATTCCAAAGGCAGAGATGTTTCGCCTCTCGCACCAAGTACCTGCGTACTTGCTCACTGGTCAAGAAGGCCATAATGCTCCTAGAGGCTGCTTGGAGCTTGATCCAGCCGCCACACCTATGGAACTTCTTCAAGTAGTCACAGAAATACCCGAGCAAGAATCGGTAGATGAATTTCAGAGCAAAGAGAATCCCGGGCGTGATGAGAAGAGTCGAAAAATTAAGCAAGATTCTGCTCAGGAAATTCCAAGAAAGGAAGGGGCTGAAGCAATTGGAAAGAAAGATGGTAAGCCTGATATTTTGTATGTATATAGGAGAAGACATCTAAGGGAAAAGAGAGCAATGTAG	2421	0.4312	MECNKDDAIKAKELAEKTLLERDLSSAKIFAKKAQDMYPNLDGLRQLLATIEVYASAEKKVNGEVDWYRVLGVEPMADDQTIRRHYRKLALILHPDKNKSVGADEAFNLITQAWTCLSDNAKRVEYDQKRNFSGIYCGKPSAPARPSGFFGNLNAANWKNRDQGSATHQTQTTRPPTSMNPTFWTMCLSCRTKFEYNAHFVNCKLTCFNCNKTFVASEASPPRVYRNASSTSSISQMNQNNLNRMRANCHVLGKVPIPAVNSSFGSGSLFMPGGISRMPSFSTAAETPGVFKVPSDTLKRACEASTPDNALAAEKTGVAGSTFHSCSFGSNSSLKGDGPRKKIRTSEFKVNSDRKYTQNGVASRHEGVSLANELGSEKDNSETGRMSAAGNYKRNVFWEIPQQKMKKILMEKARKEIQKKLEEWNVASEARNLEKSKYAATEIIEKDKKKAKDVIEKENKKITYAVKPDTKNAIRGAKPGAQGIVASDKIGKKHIPPADPVVADYTVLMSVPDPDFHDFDGDRIENAFGANQVWAVYDEDDGMPRYYALIHDVISKKPFNMRISWLNSKTNDELAPIEWVSSGFPKTSGDFRISKHVVYNSLNSFSHKVQWTKGARGIVHIYPKKGDVWALYRNWSADWNQFTKDEVIHKYDMVEVLEDYNEKQGVNVAPLGKVQGFKTVFCRNRDPRRIKNIPKAEMFRLSHQVPAYLLTGQEGHNAPRGCLELDPAATPMELLQVVTEIPEQESVDEFQSKENPGRDEKSRKIKQDSAQEIPRKEGAEAIGKKDGKPDILYVYRRRHLREKRAM*	807

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy18g2949	806	MobiDBLite	consensus disorder prediction	745	784	-	-
	Ahy18g2949	806	ProSiteProfiles	dnaJ domain profile.	66	130	IPR001623	-
	Ahy18g2949	806	SUPERFAMILY	Chaperone J-domain	41	126	IPR036869	-
	Ahy18g2949	806	CDD	DnaJ	66	119	IPR001623	-
	Ahy18g2949	806	Pfam	DnaJ domain	66	127	IPR001623	-
	Ahy18g2949	806	MobiDBLite	consensus disorder prediction	746	784	-	-
	Ahy18g2949	806	Gene3D	DnaJ domain	52	136	IPR036869	-
	Ahy18g2949	806	PRINTS	DnaJ domain signature	86	101	IPR001623	-
	Ahy18g2949	806	PRINTS	DnaJ domain signature	68	86	IPR001623	-
	Ahy18g2949	806	PRINTS	DnaJ domain signature	102	122	IPR001623	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy18g2949	Ahy-Chr18	134549328	134553751	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy18g2949	4	224	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT2G01710	30.131	1.34e-25	107

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy18g2949	-		-	ahf:112772645	1624.37

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