Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2925 ATGATGAGCAAGAAGATGAGGTTTGTTAAGAAGAACAAGAATGGAGTGAGATTATTGCCACCTGGATTTCGGTTCCAACCAACAGAAGAGGAGCTTCTATTTCAGTATTTGAAATGTAAGGTTTTCTCTTTTCAGTTGCCAGCTTCAATCATTCCTGAGATCAATGTATGCAACTATGATCCTTGGGATTTGCCAGGGAATAATAATAATTATGGGGAGCAAGAAGAGAGATACTTGTTCAGCTCAAAGGAAGTTAAGTATAGAAACGGTAACCGAATGAACAGAATAACGAAATCTGGATATTGGAAAGCAACTGGATCAGACAAAAGAATAATTTCAACATCATGTAATAATAATAATAATAGTAATATTGTTGGGATAAGAAAAACTCTTGTATTCTATCATGGAAAATCTCCAAATGGCTCTAGAACTCATTGGATCATGCGTGAGTATCGACTTGTCACTACTCCTTCTAATTCATCCCAGTATGTAGAAGACTTAGGGAATTGGGTTCTTTGCCGCATATTCAAGAAGAAAAGAAGCATAGAAAGTCAACATCACATGGTCAACAACAAAATTAATAATGTTGTCGAGGTGGCTAATAATAATAATAAGCCAATATTCTTTGATTTTATGAGGCTATATGACTCGCCAATATCTTCTTCTTCATCCTCATCTTCTTCTTGTTTAAGTTCTGATTTCATAACTCAAGTGTAA 717 0.3501 MMSKKMRFVKKNKNGVRLLPPGFRFQPTEEELLFQYLKCKVFSFQLPASIIPEINVCNYDPWDLPGNNNNYGEQEERYLFSSKEVKYRNGNRMNRITKSGYWKATGSDKRIISTSCNNNNNSNIVGIRKTLVFYHGKSPNGSRTHWIMREYRLVTTPSNSSQYVEDLGNWVLCRIFKKKRSIESQHHMVNNKINNVVEVANNNNKPIFFDFMRLYDSPISSSSSSSSSCLSSDFITQV* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2925 238 Gene3D NAC domain 28 183 IPR036093 GO:0003677|GO:0006355
Ahy18g2925 238 ProSiteProfiles NAC domain profile. 19 178 IPR003441 GO:0003677|GO:0006355
Ahy18g2925 238 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 236 - -
Ahy18g2925 238 Pfam No apical meristem (NAM) protein 20 153 IPR003441 GO:0003677|GO:0006355
Ahy18g2925 238 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 6 236 - -
Ahy18g2925 238 SUPERFAMILY NAC domain 17 178 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2925 Ahy-Chr18 134197852 134200350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2925 6 213 NAC Transcription Factor Family AT5G13180 53.812 1.46e-69 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy18g2925 NAM 3.00E-31 No_clan