Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2921 ATGATGGATGATGGCCACAAACACGGAAACAGTAGGCATACAATAGACTACTACAGAGGAGCAAATTCCCCGTGGAGTATGGCTTCGCAGCATCAAGTAACGGAACCAAATGCACTAGTTATGAATAAGAAAATTAGGTCCATTATGGCCGAAAGGCGTGCAATTCTAGAATTGGAAGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTAGAGATGAGGCCCTGCGTCAGAGGGATGAAGCAATTGCTCAGAGGGATAATGCCATAAGGGAACGCGATAATGCCCTTGCTGCACTTCAAAATCGGGAAGATGCTATCAACTTCTCATTGGGCAATGGAGTTCAACGCGGTTCAAAACGAATGCACCATCCTGCTAACTATCTAGATAACATGACAGATGCCACATACAACACAAAGGATGTGCCGATCACTGATGCCTTCCCGGTGACAATCATACCTTCTGATGCTATCAAATCACATCAGGCTAAGAAAACTAAGGAGAACAAGACAATCTCTCCTAAGGCAGCAAAGACTCCTAGTAAAGGAAAGAAAATGGGTGAGGATTTAAATCAAAGGGCATCTTCTGAAGGGACGAAGTTCAAATCAGAATGGGATAGGCAAGATGTTGGCTTGAATTTGGTTACCTTCGATGAAACTTACATGCCCGTCCCGGTTTGCACATGCACGGGAGTACCACGGCAGTGCTACAAATGGGGTAATGGTGGGTGGCAGTCATCTTGTTGTACCACCACTTTGTCAGTATATCCGCTACCGCAGCTTCCTAACAAGCGCCATGCACGTATCGGAGGGAGAAAGATGAGCGGCAGTGTCTTCACACGATTACTAAGTAGGTTTGCAGCACAAGGACATGATTTATCTGTACCATTGGATCTTAAGGACTACTGGGCCAGACATGGAACAAATCGCTACATTACTATCAAGTAG 948 0.4536 MMDDGHKHGNSRHTIDYYRGANSPWSMASQHQVTEPNALVMNKKIRSIMAERRAILELEAAISEKNEALAARDEALRQRDEAIAQRDNAIRERDNALAALQNREDAINFSLGNGVQRGSKRMHHPANYLDNMTDATYNTKDVPITDAFPVTIIPSDAIKSHQAKKTKENKTISPKAAKTPSKGKKMGEDLNQRASSEGTKFKSEWDRQDVGLNLVTFDETYMPVPVCTCTGVPRQCYKWGNGGWQSSCCTTTLSVYPLPQLPNKRHARIGGRKMSGSVFTRLLSRFAAQGHDLSVPLDLKDYWARHGTNRYITIK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2921 315 PANTHER - 2 315 IPR010409 -
Ahy18g2921 315 Pfam GAGA binding protein-like family 2 315 IPR010409 -
Ahy18g2921 315 Coils Coil 58 99 - -
Ahy18g2921 315 SMART GAGA_bind_2 2 315 IPR010409 -
Ahy18g2921 315 MobiDBLite consensus disorder prediction 160 202 - -
Ahy18g2921 315 PANTHER PROTEIN BASIC PENTACYSTEINE4 2 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2921 Ahy-Chr18 134155989 134159526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2921 2 315 BBR or BPC Transcription factor family AT2G21240 56.782 6.25e-125 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Ahy18g2921 GAGA_bind 3.20E-97 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2921 - - gmx:100785547 508.064