Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy18g2912 | ATGATGTCGTCGTCTTGGGCATCAATGGAAGCTGAGAGAGAACACCAACAACAAACCCACAACGACCATGATTTCACTTCCTTATGTTCTTTCAACAATAACTTGCCTTTCATGGAGGTTGATGATGTCAATGACATCATGACGATGATGACGATGATGAGAGACATGTCTAACTTCTTCCCTGAACCAGACACCACCAACAACAACAACCTCGTACTCCTTCATCATCACTCATCATCATCTTCTTCTTCTTCTTCTTCGTCATCACACCTTCAATGCTTTCTCCCTCCTCCTCCTCCACCAAACCCATTTGACATGCCTACCATGGCTTCCTTCCTTGACCCTCATCAAGCTTCCATAACCGCCACTACTGATTTTGGAGGTTTTCATCATCACAACTTGGAGGAACTAGGTTCTTGTTCTTCTTCTGGAAAGCCCGCACCACCACCACCACCACCACCACCACCACTGTTCTTCAACAGATCCAAGATTCTGAGGCCGCTTGATGATTCTCTACCTTCATCTGGAGCACAACCAACTCTGTTTCAGAAGAGAGCAGCACTCAGAAAAAACAACTCCTCATCACAACAACAACAACAAGGTGGTGTTCTTGGAGAAGGTGATAACAATAATAATAGTATGAAGAGAAAGGTGATGATGGAGATGGAAGATAATGGAAGCTTTGATGGGTCATCGGCATTCAACTATGATTCCGGCGATGACTTGATTGAAACCAATAACAAGAAGAATAATCAGAAAGGAGGTGGTGCCAAGAATAAGAAAGGGATGCCGGCCAAGAACTTGATGGCGGAGCGCCGTCGCCGGAAGAAGCTCAATGATAGGCTCTACATGCTCAGGTCCGTTGTTCCAAAGATTAGCAAAATGGACAGGGCTTCAATATTAGGAGATGCAATTGAATATCTGAGGGAACTGCTGCAGAGAATCAATGAGCTTCATAATGAATTGGAATCATCACCATCAACAACAACAACTACTACTAATTCTGGAAGTAGTTCACTCATCACAGCAGTACCAACAGTAGTAGCCTCATCAAGCTTTTATCCATTGACACCAACTCCACCATCACTCCCAACCCGCATTAAAGAAGAGATTTGCCCCACTTCACTTCCTAGTCCCAATGCTCAACCTCCTAGGGTTGAGGTGAGGTTGAGAGAAGGAAGGGCAGTGAACATTCACATGTTTTGTGGTCGGAAAGCAGGGCTTCTGCTGTCAACAATGAGGGCATTGGACACACTTGGCTTAGACATTCAGCAAGCTGTTATCAGCTGTTTCAATGGTTTTGCTTTGGATATTTTCAGAGCTGAGCAATGCAAAGAAGGTCAAGATGTGCATCCAGAGCAAATCAAGGCAGTGCTCTTGGATACAGCTGGGTACCCTGCCATCATCTAA | 1410 | 0.4482 | MMSSSWASMEAEREHQQQTHNDHDFTSLCSFNNNLPFMEVDDVNDIMTMMTMMRDMSNFFPEPDTTNNNNLVLLHHHSSSSSSSSSSSSHLQCFLPPPPPPNPFDMPTMASFLDPHQASITATTDFGGFHHHNLEELGSCSSSGKPAPPPPPPPPPLFFNRSKILRPLDDSLPSSGAQPTLFQKRAALRKNNSSSQQQQQGGVLGEGDNNNNSMKRKVMMEMEDNGSFDGSSAFNYDSGDDLIETNNKKNNQKGGGAKNKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLRELLQRINELHNELESSPSTTTTTTNSGSSSLITAVPTVVASSSFYPLTPTPPSLPTRIKEEICPTSLPSPNAQPPRVEVRLREGRAVNIHMFCGRKAGLLLSTMRALDTLGLDIQQAVISCFNGFALDIFRAEQCKEGQDVHPEQIKAVLLDTAGYPAII* | 470 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy18g2912 | 469 | MobiDBLite | consensus disorder prediction | 76 | 92 | - | - | |
Ahy18g2912 | 469 | Coils | Coil | 301 | 325 | - | - | |
Ahy18g2912 | 469 | MobiDBLite | consensus disorder prediction | 76 | 107 | - | - | |
Ahy18g2912 | 469 | MobiDBLite | consensus disorder prediction | 144 | 160 | - | - | |
Ahy18g2912 | 469 | PANTHER | BHLH TRANSCRIPTIONAL FACTOR | 93 | 466 | - | - | |
Ahy18g2912 | 469 | Gene3D | - | 257 | 326 | IPR036638 | GO:0046983 | |
Ahy18g2912 | 469 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 262 | 311 | IPR011598 | GO:0046983 | |
Ahy18g2912 | 469 | MobiDBLite | consensus disorder prediction | 135 | 161 | - | - | |
Ahy18g2912 | 469 | Pfam | Helix-loop-helix DNA-binding domain | 269 | 311 | IPR011598 | GO:0046983 | |
Ahy18g2912 | 469 | SMART | finulus | 268 | 317 | IPR011598 | GO:0046983 | |
Ahy18g2912 | 469 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Ahy18g2912 | 469 | CDD | ACT_UUR-ACR-like | 398 | 458 | - | - | |
Ahy18g2912 | 469 | MobiDBLite | consensus disorder prediction | 239 | 264 | - | - | |
Ahy18g2912 | 469 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 265 | 325 | IPR036638 | GO:0046983 | |
Ahy18g2912 | 469 | MobiDBLite | consensus disorder prediction | 187 | 212 | - | - | |
Ahy18g2912 | 469 | CDD | bHLH_AtAMS_like | 265 | 323 | - | - | |
Ahy18g2912 | 469 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 93 | 466 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy18g2912 | Ahy-Chr18 | 133991325 | 133996550 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy18g2912 | 160 | 442 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G26744 | 60.900 | 6.28e-102 | 311 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Ahy18g2912 | HLH | 3.20E-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy18g2912 | - | - | vra:106778861 | 383.645 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy18g2912 | 18 | 133991325 | 133996550 | Ahy18g2912 | 18 | 133991325 | 133996550 | ECH | |
Ahy18g2912 | 18 | 133991325 | 133996550 | Ahy8g2667 | 8 | 50007980 | 50012753 | hybridization | |
Ahy13g2938 | 13 | 118548949 | 118554133 | Ahy18g2912 | 18 | 133991325 | 133996550 | PCT | |
Ahy3g2599 | 3 | 116242220 | 116246511 | Ahy18g2912 | 18 | 133991325 | 133996550 | PCT | |
Ahy18g2912 | 18 | 133991325 | 133996550 | Ahy13g2938 | 13 | 118548949 | 118554133 | PCT | |
Ahy18g2912 | 18 | 133991325 | 133996550 | Ahy3g2599 | 3 | 116242220 | 116246511 | PCT |