Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2862 ATGGCACAGTGGGGTGTTCGTCATCGATTGCCATTCATGGGTCAGCACGAGGATGAGGGATATGAAAGTCAGCTTCCCGACTTCCCTAAGGAAGAGGAATCTAATGATGAAGAAGGAGAAGAAAAAATCATTAATACTGAGTCATTATTTTTGCCAGAAACTAAGAAGAGGAAGCGAATTAGCCTTAGTCAGCTCAGAGAGGTAAAAGAGGAGCCATGTGGGAGGCAAAGTAGTCGCAAGCTTAAGACAAAAAAGCCTGACAGTAAGGATAGATGGTCAACTGAGAGGTATAAATTGGCTGAGCAAAGCATGTGGGAGGTGTTAAAGGCTGAAGGTGCAACTTTTGAAAAGCCAATTACCCGACCTGCATTAAGAATGGCAGCACGTAAGCACATTGGCGATACTGGACTCTTGGACCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGAGGTACTGAGCGCCGAAGATGGTTCAACACCAAAGGAATCATGGAGTATTGGTTGGAAAGTGCTGACTTGGATGATGTCCGCCAGCTGGCAGGGGTGCAGGATCCTTACTGGATACCACCGCTAACAATTAGGGCTGGCAGTGCCCCTTCTCAGAAGACTGATTCGTCTGATGAATTGAAACTACTTAAAATGGAAATGGCCCAACTGAAGAAAGATATGCAGCAGCTCGTTGCCAAGCAGCAACTGAAGAGTGAAGCTAGTCTCATGGAGGAGTCTCACAAGGAATTGGTGAAGTGGAGATCTGGTATTGATCATCACCTTACTGAAATCATGGCATCTCTAAAGGGTGTGCAGGGCAAGTATGGTGAATTTGCAATTTGGAAAACTAAAGTTGAACAACAGTTTGCCGAAATAACAAATAAATTGAGTGATCTCAAAGCATCAAGGGAATGTGTTCCCCCTAGTTCTCCTTCAGACAGGTGGAAAGATTGGATAGAAAATACTAACCTACCGGAAGATGAATTTGCAACTTGGATTGGAAGTTCTGAGCTGCTTAATGTTCCACCAGAGATTGTACTTGATGACCCCAACACATCCCTCCCGACGCACTTACTTAGCGAAGGATTGGTTAACAAGCGGAGTGATTTGCTGGAGGTGGTGCCTTTCAAACAAGAAGATCCTCCTAATGTGACCCCTGACTCGTCTACGACTGTTAATTCCAAGTCAGACCATGACAACTCAATGATGATGTTTCAGGAGATGTACATGGATATATTCAAATGGAAAGAACAAATTGATAAGCAGATGATGGAGTTATCAAACACTGTATACGGTATGCTGGCAATGAAGTAG 1308 0.4419 MAQWGVRHRLPFMGQHEDEGYESQLPDFPKEEESNDEEGEEKIINTESLFLPETKKRKRISLSQLREVKEEPCGRQSSRKLKTKKPDSKDRWSTERYKLAEQSMWEVLKAEGATFEKPITRPALRMAARKHIGDTGLLDHLLKHIDGKVAPGGTERRRWFNTKGIMEYWLESADLDDVRQLAGVQDPYWIPPLTIRAGSAPSQKTDSSDELKLLKMEMAQLKKDMQQLVAKQQLKSEASLMEESHKELVKWRSGIDHHLTEIMASLKGVQGKYGEFAIWKTKVEQQFAEITNKLSDLKASRECVPPSSPSDRWKDWIENTNLPEDEFATWIGSSELLNVPPEIVLDDPNTSLPTHLLSEGLVNKRSDLLEVVPFKQEDPPNVTPDSSTTVNSKSDHDNSMMMFQEMYMDIFKWKEQIDKQMMELSNTVYGMLAMK* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2862 435 Coils Coil 280 300 - -
Ahy18g2862 435 MobiDBLite consensus disorder prediction 380 396 - -
Ahy18g2862 435 MobiDBLite consensus disorder prediction 11 30 - -
Ahy18g2862 435 MobiDBLite consensus disorder prediction 67 92 - -
Ahy18g2862 435 PANTHER PROTEIN DYAD 2 434 IPR044221 GO:0007131|GO:0051177|GO:0051321
Ahy18g2862 435 PANTHER DYAD PROTEIN 2 434 - -
Ahy18g2862 435 MobiDBLite consensus disorder prediction 1 48 - -
Ahy18g2862 435 MobiDBLite consensus disorder prediction 375 396 - -
Ahy18g2862 435 Coils Coil 204 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2862 Ahy-Chr18 133368580 133372523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2862 77 171 PHD Transcription Factor Family AT5G22260 35.789 3.36e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2862 - - gmx:100806484 624.009