Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2856 ATGGAGAGGAAACCATCATCCCTTGGGTTCTTCTTCTTCCTTCTCATTGTTATCTTTGCTGCTCAAATGGTGGTGCATACAGAGGGAAGAGTGTGTCAGTCAAAGAGCCACATGTTCAAGGGTGGATGCTGGGGTGACCACAACTGTGCTCTAGTTTGCCGGAACGAGGGCTTTTCCGGTGGCCGCTGCCGCGGGTTTCGCCGCCGCTGCTTTTGCACTAAGCTTTGTTAA 231 0.5195 MERKPSSLGFFFFLLIVIFAAQMVVHTEGRVCQSKSHMFKGGCWGDHNCALVCRNEGFSGGRCRGFRRRCFCTKLC* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2856 76 ProSitePatterns Gamma-thionins family signature. 30 53 IPR008176 GO:0006952
Ahy18g2856 76 PRINTS Purothionin signature 61 75 IPR008176 GO:0006952
Ahy18g2856 76 PRINTS Purothionin signature 31 46 IPR008176 GO:0006952
Ahy18g2856 76 Pfam Gamma-thionin family 30 76 - -
Ahy18g2856 76 Gene3D - 30 76 IPR036574 -
Ahy18g2856 76 PANTHER DEFENSIN-LIKE PROTEIN 7 76 - -
Ahy18g2856 76 PANTHER DEFENSIN-LIKE PROTEIN 1 7 76 - -
Ahy18g2856 76 SUPERFAMILY Scorpion toxin-like 30 76 IPR036574 -
Ahy18g2856 76 SMART gth_4 31 76 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2856 Ahy-Chr18 133242977 133244445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2856 12 76 Plant Defensins Gene Families AT5G63660 67.692 4.99e-29 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2856 - - vvi:100252765 100.523