Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2843 ATGGACAAATACGAGGCTGTGAAGGATTTGGGAGCTGGGAATTTCGGTGTTGCCAGGCTCATGAGGAACAAGGTCACAAAGGAGCTCGTCGCAATGAAATACATCGAGCGTGGCCGCAAGATTGATGAGAACGTGGCTAGAGAGATTATCAACCACAGGTCCCTTAGGCACCCCAATATAATTCGTTTCAAGGAGGTGGTGTTGACTCCGACGCATCTAGCTATAGTAATGGAGTATGCTGCCGGAGGAGAACTCTTCGAGAGGATATGCAGTGCTGGCAGGTTCAGTGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATCTCTGGTGTCCATTTCTGTCATAATATGCAAATATGCCACAGAGATTTGAAGCTAGAAAATACCCTTTTAGATGGAAGTCCAGCACCTCGCTTAAAAATTTGTGACTTCGGTTATTCCAAGTCATCTTTGCTGCATTCGCGACCCAAATCAACTGTTGGAACACCAGCTTATATAGCACCGGAGGTTCTTTCTAGGCGAGAGTATGATGGCAAGTTGGCTGATGTGTGGTCATGTGGAGTGACTCTTTATGTCATGTTGGTTGGAGCATATCCATTCGAGGACCAGGATGACCCGAGGAATTTCAGAAAAACAATTCAGCGTATAATGAGTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAGGATTGTAGACAACTTCTCGCTCGTATATTTGTTGCAAATCCATTGAGGAGAATCACACTAAAGGAAATTAAGAACCACCCATGGTTTTTAAAAAATCTTCCAAGAGAGCTAACTGAACCGGCTCAAGCTATCTATTACCAGAGAGACAATCCAAACTTTCATGTTCAGAGTGTGGAGGAGATAATGAAAATTGTGGGAGAGGCGAGAAACCTGCCTCCAGTATCTAGGCCTGTCAAAGGTTTTGGCTGGGAAGGCGAAGATGACGAAGGAGCAGAAGAAGTAGAAGAAGTAGAGGAAGAAGTGGAGGAGGAAGAGGAAGAAGATGAGTATGATAAGAGGGTCAAAGAGGTTCATGCAAGTGGAGAATTCCAAGTTAGTTAA 1074 0.4413 MDKYEAVKDLGAGNFGVARLMRNKVTKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVHFCHNMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMSVQYKIPDYVHISQDCRQLLARIFVANPLRRITLKEIKNHPWFLKNLPRELTEPAQAIYYQRDNPNFHVQSVEEIMKIVGEARNLPPVSRPVKGFGWEGEDDEGAEEVEEVEEEVEEEEEEDEYDKRVKEVHASGEFQVS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2843 357 MobiDBLite consensus disorder prediction 308 357 - -
Ahy18g2843 357 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Ahy18g2843 357 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2843 357 MobiDBLite consensus disorder prediction 317 341 - -
Ahy18g2843 357 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2843 357 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Ahy18g2843 357 Coils Coil 318 342 - -
Ahy18g2843 357 SUPERFAMILY Protein kinase-like (PK-like) 2 293 IPR011009 -
Ahy18g2843 357 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2843 357 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Ahy18g2843 357 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 350 - -
Ahy18g2843 357 CDD STKc_SnRK2 3 259 - -
Ahy18g2843 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Ahy18g2843 357 PANTHER SERINE/THREONINE KINASE 2 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2843 Ahy-Chr18 132873691 132876826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2843 3 281 CBL-interacting serine-threonine protein kinases AT4G24400 41.667 4.96e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Ahy18g2843 Pkinase 6.20E-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2843 K14498 - gmx:547811 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2843 18 132873691 132876826 Ahy18g2843 18 132873691 132876826 ECH
Ahy18g2843 18 132873691 132876826 Ahy8g2559 8 48506486 48509455 hybridization
Ahy13g2988 13 120475753 120478775 Ahy18g2843 18 132873691 132876826 PCT
Ahy3g2651 3 117834242 117837689 Ahy18g2843 18 132873691 132876826 PCT
Ahy18g2843 18 132873691 132876826 Ahy13g2988 13 120475753 120478775 PCT
Ahy18g2843 18 132873691 132876826 Ahy3g2651 3 117834242 117837689 PCT