Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2834 ATGAAGCCGAGACCAAAGTTTACAGAGAGTTCAATGGCCGCAGAAATTTGTCGCGCGTCTCCTCTCTTATCCGTTAAAACTCAACTTTTCCACGCGCCACCATCACCAACCACCACCACCACCACTACCAGCAGATTCCACACATCATCTCATTCCAAAACTTCCTTCTTCTCTCATCGCGTTCTCAATCTAAATGCCTCTTTCTCCGCTGTCCGTCGCCGCAGCTCCGCCGTCACCTGCCAGGCTAACACTCTCTTCGAGATCGACTCCGTCGCAAAAGCCGGCCAAGACCGTCTGGAAAAGGTGCCGGTGTCGAATATAAGGAACTTCAGCATAATTGCGCATATTGATCACGGGAAATCCACGTTAGCAGATAAATTGCTTCAGGTTACTGGTACCGTTCACCAGCGAGAGATGAAGGACCAGTTTCTCGATAACATGGACCTCGAGAGAGAAAGAGGCATCACTATTAAGCTCCAGGCAGCTCGAATGCGGTATTTGTTTGAGAATAAACCATATTGCTTGAATTTGATTGATACTCCAGGGCATGTTGACTTCTCGTATGAGGTTTCTCGGTCACTTGCTGCATGTGAGGGTGCTCTTCTTGTAGTAGATGCTTCTCAGGGAGTAGAAGCACAAACGCTAGCTAATGTTTATTTGGCCTTGGAAAACAATCTAGAAATTATCCCAGTTTTGAACAAGATAGATCTTCCGGGTGCTGAACCAGATCGAGTTATTAAGGAGATTGAAGAGGTTGTGGGTCTGGATTGTAGCAATGCTATTCTGTGCTCCGCAAAGGAAGGAATAGGTATAATTGATATTCTCAATGCAATTGTTGCGAGAATTCCACCACCTGCTGATACATCACAAAGGCCATTAAGGGCTTTAATATTTGATAGTTACTATGATCCATATAGAGGTGTTATTGTATACTTTCGGGTTGTGGACGGGACTATAAAGAAAGGTGATAGAGTCTATTTTATGGCTAGTGGGAAGGATTATTTTGCTGATGAAATTGGAGTTTTGTCTCCGAATCAACAAGAGGTTAAAGAATTATATGCTGGAGAGGTGGGCTACCTGTCGGCGTCAATAAGAACAGTAGCTGATGCCAGAGTGGGTGACACAGTGACTCACTATGGTCGAAAGGCAGATCAATCACTCCCTGGATACGAGGAAGCGACTCCTATGGTGTTTTGTGGCCTGTTTCCTGTTGACGCTGACCAATTTCCTGATCTACGTGATGCCCTTGAGAAGCTACAACTTAATGATGCTGCACTGAAGTTTGAACCGGAGACTTCAAGTGCCATGGGATTTGGGTTTAGATGTGGGTTTCTGGGTCTTCTCCACATGGAAATTGTCCAGGAAAGACTTGAGAGAGAATACAATCTGAGCTTGATAACTACCGCTCCAAGTGTTGTTTACAGAGTGAACTGTGTAGATGGAGATACTGTTGAATGCTCGAATCCATCTTTACTTCCTGAACCTGGAAAAAGGAGATCAATTGAGGAGCCATATGTTAAGATTGAGATGCTTTCGCCAAAGGATTATATCGGGTCACTTATGGAACTGGGACAAGACAGAAGAGGATTGTTTAAAGAAATGAAGTTTATCACTGAAAATAGAGCATCAATCACCTACGAAATACCACTAGCGGAGATGGTTGGTGATTTCTTTGACCAGTTAAAGTCGAGAAGTAAAGGTTATGCTAGTATGGAGTATACCTTTATCGGGTACAGAGAAAGTGATTTAATTAAACTTGACATATTGATAAATGGTGACAGTGTGGAGCCATTGGCTACGATTGTCCACAGAGATAAGGCATATTCTGTGGGAAGGGCTTTGACTCAAAAGCTGAAGGAGCTCATACCACGTCAAATGTTTAAAGTACCAATCCAAGCATGCATAGGATCAAAAGTGATTGCTAGTGAAGCTTTATCTGCAATAAGGAAGGATGTATTAGCCAAATGTTATGGTGGCGACATTTCGAGGAAAAAGAAGTTACTTAAGAAACAGGCTGAAGGAAAGAAAAGGATGAAGTCCATTGGTAAAGTTGATGTGCCTCAAGAAGCTTTCATGGCGGTCTTGAAATTGGAAAAGGAGGTGATATGA 2109 0.4329 MKPRPKFTESSMAAEICRASPLLSVKTQLFHAPPSPTTTTTTTSRFHTSSHSKTSFFSHRVLNLNASFSAVRRRSSAVTCQANTLFEIDSVAKAGQDRLEKVPVSNIRNFSIIAHIDHGKSTLADKLLQVTGTVHQREMKDQFLDNMDLERERGITIKLQAARMRYLFENKPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPDRVIKEIEEVVGLDCSNAILCSAKEGIGIIDILNAIVARIPPPADTSQRPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPNQQEVKELYAGEVGYLSASIRTVADARVGDTVTHYGRKADQSLPGYEEATPMVFCGLFPVDADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVDGDTVECSNPSLLPEPGKRRSIEEPYVKIEMLSPKDYIGSLMELGQDRRGLFKEMKFITENRASITYEIPLAEMVGDFFDQLKSRSKGYASMEYTFIGYRESDLIKLDILINGDSVEPLATIVHRDKAYSVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2834 702 Gene3D - 104 287 IPR027417 -
Ahy18g2834 702 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 99 699 IPR027518 -
Ahy18g2834 702 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 145 160 IPR031157 -
Ahy18g2834 702 Pfam GTP-binding protein LepA C-terminus 590 696 IPR013842 -
Ahy18g2834 702 PANTHER TRANSLATION FACTOR GUF1-RELATED 95 696 IPR006297 GO:0005525
Ahy18g2834 702 CDD EF4_III 395 470 - -
Ahy18g2834 702 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 303 IPR027417 -
Ahy18g2834 702 Gene3D Translation factors 288 387 - -
Ahy18g2834 702 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 105 286 IPR000795 GO:0003924|GO:0005525
Ahy18g2834 702 SUPERFAMILY Translation proteins 267 389 IPR009000 -
Ahy18g2834 702 Hamap Elongation factor 4 [lepA]. 102 700 IPR006297 GO:0005525
Ahy18g2834 702 SUPERFAMILY EF-G C-terminal domain-like 394 472 IPR035647 -
Ahy18g2834 702 Pfam Elongation factor Tu GTP binding domain 106 283 IPR000795 GO:0003924|GO:0005525
Ahy18g2834 702 CDD LepA 108 285 - -
Ahy18g2834 702 CDD lepA_C 503 582 IPR035654 -
Ahy18g2834 702 Pfam Elongation factor G C-terminus 501 587 IPR000640 -
Ahy18g2834 702 Gene3D Elongation Factor G (Translational Gtpase), domain 3 388 469 - -
Ahy18g2834 702 Pfam Elongation factor Tu domain 2 307 377 IPR004161 GO:0005525
Ahy18g2834 702 Gene3D - 582 656 IPR038363 -
Ahy18g2834 702 CDD EF4_II 293 378 - -
Ahy18g2834 702 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 95 696 - -
Ahy18g2834 702 SUPERFAMILY EF-G C-terminal domain-like 501 595 IPR035647 -
Ahy18g2834 702 TIGRFAM small_GTP: small GTP-binding protein domain 108 277 IPR005225 GO:0005525
Ahy18g2834 702 Gene3D - 470 581 - -
Ahy18g2834 702 SMART EFG_C_a 500 588 IPR000640 -
Ahy18g2834 702 TIGRFAM lepA: elongation factor 4 106 697 IPR006297 GO:0005525
Ahy18g2834 702 PRINTS GTP-binding elongation factor signature 176 186 IPR000795 GO:0003924|GO:0005525
Ahy18g2834 702 PRINTS GTP-binding elongation factor signature 152 160 IPR000795 GO:0003924|GO:0005525
Ahy18g2834 702 PRINTS GTP-binding elongation factor signature 228 237 IPR000795 GO:0003924|GO:0005525
Ahy18g2834 702 PRINTS GTP-binding elongation factor signature 109 122 IPR000795 GO:0003924|GO:0005525
Ahy18g2834 702 PRINTS GTP-binding elongation factor signature 192 203 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2834 Ahy-Chr18 132643015 132652435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2834 107 340 Eukaryotic Initiation Factors Gene Family AT3G22980 34.413 2.83e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2834 K21594 - gmx:100809693 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2834 18 132643015 132652435 Ahy8g2551 8 48396505 48406356 hybridization