Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2820 ATGTCTAATGAGGATTATGTAGATGAAACCAATAATGTTGACGGGTTTTACGGAAATTTGGAGAATCCCTTGAGAAACGGTAATGAGCTCCTGGACGACGATATCTTCATGGATGCTAACTTGGCAAATGCAGAAGTTGGTGCTTCTGAACCCAATGAAGGTGCCCATTTTGATCAATTGGATGAATCTTATAAGATTGATGGGTGGGAGGACATAGGAAAGACTGAGTTCTTGAATATTGTAGATGTTGATATAAAAAGATATCATTTCAGTGATCTAGGAGTGGCTTTTGATTTCTACAATGCATTTGCCAAGTCAAGGGGATTTAGTGGTCGAAAAAGTAAGACGCGAAAGCACAATGGGATAATCAATCGACAGAATTTTGTTTGTTGTCGCGAGGGCTTCCGACAAAAAAAGCCAGATAATATGCATACCAGAAAACAAGAGCCTAGAGCTGAAACTAGATGTGGCTGTAAGGCAAAGGTTCAGGTGTCGTTTGACGCTGTTAGTGGTCGCTGGATTGTTTCAAAATTTTCTGATTTGCATAATCACGACCTTCTTCCTCCAATTTTTACTGCAATGCTTCCTGGTCACAGGAAAATACCTGCTGCAGACATTGAGCAAATAAATATAATGAGGAAGGGTGGATTAGGCACTGCACATATTTTTGCAGCACTCTCAAGCCAATCTGGTGGTCACCACAATGTTCCCTTTTTGCCCAGGGACTTGTACAATCAAGTCGCACAACAACGTCGACGGTTGAAGGGTGATGCTAGTGCGGCTCTTCAATTTTTGAGGAAGATGAAGTCCATTGATCCTGTCATGGTTATAAGATATGAGGTTGATAGGTTTCACTCGATAAAGAATTTATTTTGGTGTGATGGAATAAGCCAAATGGATTATCAATTGTTTGGTGATGTATTGGCTTTTGACGCTACTTACAAGAAGAACAAATATCATTGTCCGCTTGTCGTTTTTTCGGGTGTTAATAACCATAACCGCACAGTTGTCTTTGCAGCCGCTCTTGTGTGTGATGAGTCGGAGCAAACATATATTTGGTTGTTAAAAAGTTTGCTGGAAGCAATGAAGGGGAAGGCCCCAATTTCAGTTATCACAGATGGTGCCCTTTCAATGAAAAATGCAATCGAAAAAGTTTTTCCTAATGCACATCATCGCCTATGTGCTTGGCACCTTATTCGCAATGCCACGAGTAATGTAGGTAATCCTAGGTTCACATCGCAGTTTAAGAAGTGCATGCTGGGTGATTACGAGGTTGGTGTATTCCGTAGTAAGTGGGATCGGATGGTTGAAGAGTTTGATGTGCAAGACAAGCAATGGATAATTGATATGTATGATAACCGTCATAGTTGGGCAACAGCACATATCCGTGGGAAGTTCTTTGCTGGGTTTAGGACCACTTCTCGATGTGAGGGGTTGCACTCAGTTATTGCAAAGTATGTCAAGTCCAGGTATAATTTAAGAGATTTTGTAGAGCACTTTGATAGATGTGTTGCCTACATTCGTTTCAAAGATAGTCTAGCAGACTTTGAATGTGCACATGGAGTACCTGTGATGCAAACTCATTTATTGTCATTGGAGAAGTCTGCAGCTAATTTATATACAAGAGAGGTATTTTTTCTATTTCGCCCTATTATTATAAGGTCTGGTTCAATGAAAGTGTTAGATTGCATTGATGTTGGTTCTTATATGTTATACACGGTGGTTAAGTATGGTAGTCCTAACGATACATGGCAAGTATCTTTCTGTGATTTACCAATGGAGTTTACTTGCTCCTGTATGAGGATGGAGTCATTTGGCATTCCTTGCGAACACATTCTATCTGTTTTAGTTACACTTGACATTTGTGAATTGCCAAAATGTTTAGTTCTAGATAGGTGGACCAAAAATGTGAAACAACAAATACAAGATACAAGGGGGTTCACTTGGGATTGCTTAAAGTCTACCCAATACTGGTGTTTGATGGACTGGTTTAGATTGGTGGCTACACTATCAGCAGGTAAAGATGATAGGTTCAGGAGCATGAGGGATTGGGCAATAAACACAGTGGATAAAATGAAAGCTGATGATATTGCTAGTACAATTGCTTCTAGTAGTGCAATTCCTGCCACTCATACAGATCCTCGTGACCCCCCAATTCGTAGAAGAGCTAAGGATCGTGCCGGACAACGGTGTAGTATATGCCGGGAGCTCGGACATAACAAAACTACATGTCCAGATCGGAGTAAGTATGATAGGGATTCACATGAACGGCATAGTCTACCTACAGATGATGATGCATATGAGGCTATGTGGGATGAGGAAGAAGACTTCATTTACGAGGAAGATGAAGGTGAATGTGCGGTAAATTCTAGTTCTGAATCTAGCAGAGATCAAGATATGGAGATAGATGACTCTAATTATGAATTTGGAAATGAGGACGATGGAGTCAATGAAATTAATTAG 2463 0.4044 MSNEDYVDETNNVDGFYGNLENPLRNGNELLDDDIFMDANLANAEVGASEPNEGAHFDQLDESYKIDGWEDIGKTEFLNIVDVDIKRYHFSDLGVAFDFYNAFAKSRGFSGRKSKTRKHNGIINRQNFVCCREGFRQKKPDNMHTRKQEPRAETRCGCKAKVQVSFDAVSGRWIVSKFSDLHNHDLLPPIFTAMLPGHRKIPAADIEQINIMRKGGLGTAHIFAALSSQSGGHHNVPFLPRDLYNQVAQQRRRLKGDASAALQFLRKMKSIDPVMVIRYEVDRFHSIKNLFWCDGISQMDYQLFGDVLAFDATYKKNKYHCPLVVFSGVNNHNRTVVFAAALVCDESEQTYIWLLKSLLEAMKGKAPISVITDGALSMKNAIEKVFPNAHHRLCAWHLIRNATSNVGNPRFTSQFKKCMLGDYEVGVFRSKWDRMVEEFDVQDKQWIIDMYDNRHSWATAHIRGKFFAGFRTTSRCEGLHSVIAKYVKSRYNLRDFVEHFDRCVAYIRFKDSLADFECAHGVPVMQTHLLSLEKSAANLYTREVFFLFRPIIIRSGSMKVLDCIDVGSYMLYTVVKYGSPNDTWQVSFCDLPMEFTCSCMRMESFGIPCEHILSVLVTLDICELPKCLVLDRWTKNVKQQIQDTRGFTWDCLKSTQYWCLMDWFRLVATLSAGKDDRFRSMRDWAINTVDKMKADDIASTIASSSAIPATHTDPRDPPIRRRAKDRAGQRCSICRELGHNKTTCPDRSKYDRDSHERHSLPTDDDAYEAMWDEEEDFIYEEDEGECAVNSSSESSRDQDMEIDDSNYEFGNEDDGVNEIN* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2820 820 MobiDBLite consensus disorder prediction 745 768 - -
Ahy18g2820 820 ProSiteProfiles Zinc finger SWIM-type profile. 572 620 IPR007527 GO:0008270
Ahy18g2820 820 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 650 IPR031052 GO:0006355
Ahy18g2820 820 SMART 26again6 595 622 IPR006564 GO:0008270
Ahy18g2820 820 MobiDBLite consensus disorder prediction 745 765 - -
Ahy18g2820 820 Pfam SWIM zinc finger 595 616 IPR007527 GO:0008270
Ahy18g2820 820 PANTHER OS02G0262500 PROTEIN 89 650 - -
Ahy18g2820 820 Pfam MULE transposase domain 307 401 IPR018289 -
Ahy18g2820 820 SUPERFAMILY Retrovirus zinc finger-like domains 717 751 IPR036875 GO:0003676|GO:0008270
Ahy18g2820 820 MobiDBLite consensus disorder prediction 780 820 - -
Ahy18g2820 820 MobiDBLite consensus disorder prediction 703 727 - -
Ahy18g2820 820 Pfam FAR1 DNA-binding domain 98 188 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2820 Ahy-Chr18 132513608 132516266 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy18g2820 MULE 7.40E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2820 - - adu:107465142 1653.65