LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy18g2816	ATGGCTTCCACCTCTTCTTCTTCGTCAAGATCATGCAAGTATGATGTGTTTCTCAGCTTCAGGGGTGAAGATACTCGTTCTGGATTCACTAGCCATCTCTATGCCGCCCTCACAAGGAAGGGAATCACTACCTTCATTGATGACAACAACCTTCGCAAAGGTGATGTTATTTCACATGAACTTCTCACAGCAATTGAACACTCTATGTTTGCAATCATTGTTCTCTCACCCAACTACGCTTCCTCCCCTTGGTGCTTGGACGAGCTCCAAAAGATTCTTGAATGCAAGGATAACTTGGATCAACACATCGAGGTGGTGTTCTACGGTGTGGAACCTTCTGATGTGAGGCACCAGAAAGGAACCTTCGGAGAAGCTTTCAGGAAACATGAACACAGATTCGGACTAGAAAGTGACAAGGTTAGAACATGGAGACATGCGTTAACACAAGTTGCCGGTTTCTCTGGTTGGACCTCCAAAAATCAGAATGAGGCAACATTGGTGGAAAACATTTCTCAGAGTATACATAAAAAATTGATCCCAAACTTGCCATCTTCCATGAACAAGCTTGTAGGGATTGATTCAAGAGTGAAACAAGTGATTAGTCACATTGGTATTGGGCTGAATGATGTTCGTTATATAGGCATATGTGGGATGGGCGGCATAGGTAAGACAACTATTGCTAGAATCGTATATGAAGACATCCAAAGTAAATTTGAAGTTACTTATTTTCTTGCAAATGTAAGAGAAACATGTGTTAAAAATGGTATTGTTCAAGCACAAAAAAATTTTGTTGGCCATATCAATGGAAGCTCCTGTAATTTTGATGATGAGTATGATGGGAGGAGAATAATTCGGGCTTCTTTGTGTCACAAAAAGGTTCTTCTTGTTCTTGATGATATAAATGAAGAAAAACAGTTGAAGAATTTGGCCGAGGAACAAGACTGGTTTGGTCCTGGAAGCAGAATAATTATCACAACTAGAGACATGCATCTTCTAAAGATACATGATGCACATAAAATTTACAATGTTGAAGGGTTAGGGGAAAGTGAAGCCTTTGATCTCTTTCATTTGAAGGCTTTTAAACAACAAAAGTCTGGAGAAGAGTATTTGGATTTGTCCAAACAGGTGGTCAAATATTGTGCTGGTCTTCCATTGGCACTTGAGGTTTTGGGTTCCCACCTTTATGGTAGACCCATTCAAGATTGGCAAAGTGCTCTTAGAAAATTAGAGAGCTTTCCAAATGTCGATATTTTTGATACGTTGAAAATAAGTTATGATGGTTTAGATTCCATGGACAAGGATATTTTTTTAGACATTGCTTATTTTTTCATAGGATGGTTACAAGGTAATGTAATAGCTATGTTAAAAGGGCGTGGTTATCATCTTGAAATTGGTATCGCGACTTTGATTGATAGATCTCTACTCACTATAAATGAGGAAGGTAGGTTGAAGATGCATGATTTGGTTGAAGAAATGGGCAAACATATTGTAATTCAGGAATCTCCAAATGATCCTAGCAAGCGCAGCAGGTTGCAAAGTTACGAGGATATCGATATTGTTTTTCAAAACAAGGGAACTGAGGCAATTCAGAGCATTGTTGTAGACGGGAATATTGAGTTATATGAAGAACAATATACAGTGCGTTGGAGAGATTTAACTTTTTTAAATGTATGTCACCTAAAGCTCCTCAGTTTAGATGGCGTGATGGCTCCAATTCTTAGCTATATTCCTCGTTCATTGAGAGTTTTGAGTTGGATAGATTGTCCAATGGAAACTCTGCCCTTTATGGATCCATACTATGAGCTTGTTCAAATTAATGTGTCTGATAGCGACTGCATTGTACACTTATGGCATGGAAAAAAGTTTCTGAAAAAGCTGAAGTACTTATATCTGTCTGATTGCTTTCGGCTGAAACGAATTCCAGATCTTTCTGAAGCTCCCAATCTTGAAATACTTGACGTTCAATTTTGTAAAGAACTGAATGATTTTCCCTCGTATCTCACACGCCACAAGAGCCTTGTTAAACTTATTTTATATGGTTGCTCAAGTCTTGAAACTCTTGGGAGTAAATTGGAGATGAGTTCCCTCAAGGAACTAGATCTTGATTTCTGCACAAGTATGAGGAAACTTCCAGAATTTGGAGAATGCATGAAACATTTATTAGTTCTTTCTTTGTCGAAAACAGCCATAGAAGAACTACCCACAACGGTTGGTTGTTTAGTTGGCCTAAAGAAGTTGCACTTAAACGGTTGCGAAAGGCTTACTTGCCTTCCAGACAGCATTCAAAAGTTAAAATCCCTCACCCTTTTGAATCTTTCTGGCTGCCCAAATGTCCTTCAGTCTTTGCATTCTCTATCTAGTCTGACCTCATTGGACACTCTGAAATTATCGGGGTGTTTTCTCACATTTCAAGAGTCATGGTCTTACAATTTTGCCAATTTAGTGTCCTTGATGGATTTGGACTTATCAGAAAACAATTTTGTAAGGGTTCCAATAAATATCCATGAACTCCCCAAGCTTAGACGTCTGAATCTAGACCGCTGCCCTAATCTGAAGGTTTTACCAGAGCTTCCATCAAGTATAAGAGAGCTAAATGCACGACATTCTACATCACTGGATATAAAGCATTGGAATGTGATATCAAAGGTGTGTTGTGGCTTTGCAGCATCAACTAACCATGATTCTGATGGGATCTTGCAAATGTGGGTTGCACAGAACCAAATAAAGATATTTGGGTTGACCATAGGGGAGGAAATTCCATTGTGGTTTGTCCATCAAGAAGAGGGTAATGGAGTATCAGTCACATTGCCACATAATGAAACCATGCCACTTGCTCTCTGTTTCCGATTATGCCCAACGAAGAGTCGTCCTAATTTTGCGCAAGATTCGTCGGTGATTTGCAACGGTAAGGAATTCATTCAAAAGAATTTAATTTGGGCGCGTGAAACTGAAAATTCTCAGCATTTCATCCTTTGCTTGACCAGTGACTATTTTGTTGACCAATTTTGCCAAGACTATCGCTTTGAACTGGTATTGCCTAGTTACGTTCAAATGAAAGTAGAGAATTCTGGGGCTCGGTGGGTGTGCAAGCAAGACATCCAAGATTTGAAGAAAATTGGAACCGGAACATCAAAAAGAAAAGCAACTTTTGATCTGAACTTTTGA	3165	0.3915	MASTSSSSSRSCKYDVFLSFRGEDTRSGFTSHLYAALTRKGITTFIDDNNLRKGDVISHELLTAIEHSMFAIIVLSPNYASSPWCLDELQKILECKDNLDQHIEVVFYGVEPSDVRHQKGTFGEAFRKHEHRFGLESDKVRTWRHALTQVAGFSGWTSKNQNEATLVENISQSIHKKLIPNLPSSMNKLVGIDSRVKQVISHIGIGLNDVRYIGICGMGGIGKTTIARIVYEDIQSKFEVTYFLANVRETCVKNGIVQAQKNFVGHINGSSCNFDDEYDGRRIIRASLCHKKVLLVLDDINEEKQLKNLAEEQDWFGPGSRIIITTRDMHLLKIHDAHKIYNVEGLGESEAFDLFHLKAFKQQKSGEEYLDLSKQVVKYCAGLPLALEVLGSHLYGRPIQDWQSALRKLESFPNVDIFDTLKISYDGLDSMDKDIFLDIAYFFIGWLQGNVIAMLKGRGYHLEIGIATLIDRSLLTINEEGRLKMHDLVEEMGKHIVIQESPNDPSKRSRLQSYEDIDIVFQNKGTEAIQSIVVDGNIELYEEQYTVRWRDLTFLNVCHLKLLSLDGVMAPILSYIPRSLRVLSWIDCPMETLPFMDPYYELVQINVSDSDCIVHLWHGKKFLKKLKYLYLSDCFRLKRIPDLSEAPNLEILDVQFCKELNDFPSYLTRHKSLVKLILYGCSSLETLGSKLEMSSLKELDLDFCTSMRKLPEFGECMKHLLVLSLSKTAIEELPTTVGCLVGLKKLHLNGCERLTCLPDSIQKLKSLTLLNLSGCPNVLQSLHSLSSLTSLDTLKLSGCFLTFQESWSYNFANLVSLMDLDLSENNFVRVPINIHELPKLRRLNLDRCPNLKVLPELPSSIRELNARHSTSLDIKHWNVISKVCCGFAASTNHDSDGILQMWVAQNQIKIFGLTIGEEIPLWFVHQEEGNGVSVTLPHNETMPLALCFRLCPTKSRPNFAQDSSVICNGKEFIQKNLIWARETENSQHFILCLTSDYFVDQFCQDYRFELVLPSYVQMKVENSGARWVCKQDIQDLKKIGTGTSKRKATFDLNF*	1055

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy18g2816	1054	Gene3D	Ribonuclease Inhibitor	547	713	IPR032675	-
	Ahy18g2816	1054	Gene3D	-	7	177	IPR035897	-
	Ahy18g2816	1054	Gene3D	Ribonuclease Inhibitor	714	892	IPR032675	-
	Ahy18g2816	1054	Pfam	NB-ARC domain	208	418	IPR002182	GO:0043531
	Ahy18g2816	1054	PRINTS	Disease resistance protein signature	287	301	-	-
	Ahy18g2816	1054	PRINTS	Disease resistance protein signature	380	394	-	-
	Ahy18g2816	1054	PRINTS	Disease resistance protein signature	212	227	-	-
	Ahy18g2816	1054	PRINTS	Disease resistance protein signature	691	707	-	-
	Ahy18g2816	1054	SMART	till_3	13	153	IPR000157	GO:0007165
	Ahy18g2816	1054	ProSiteProfiles	TIR domain profile.	12	178	IPR000157	GO:0007165
	Ahy18g2816	1054	Pfam	TIR domain	13	188	IPR000157	GO:0007165
	Ahy18g2816	1054	SUPERFAMILY	Toll/Interleukin receptor TIR domain	3	156	IPR035897	-
	Ahy18g2816	1054	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	174	439	IPR027417	-
	Ahy18g2816	1054	Gene3D	-	178	343	IPR027417	-
	Ahy18g2816	1054	SUPERFAMILY	L domain-like	484	877	-	-
	Ahy18g2816	1054	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	9	967	-	-
	Ahy18g2816	1054	Gene3D	-	345	429	IPR042197	-
	Ahy18g2816	1054	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	9	967	IPR044974	GO:0006952
	Ahy18g2816	1054	Pfam	C-JID domain	916	1032	IPR045344	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy18g2816	Ahy-Chr18	132414596	132418591	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy18g2816	663	876	WRKY Transcription Factor Family	AT4G12020	27.935	2.34e-06	50.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy18g2816	-		-	ahf:112769348	1625.91