Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2805 ATGGGAGACGGAGGTTCCGGCAACCGCGGCGGCAACAGCAACAACAGCGGCGGCGGAAGCAACAAGCCGGAGTGGCTCCAGCAATACGATCTCATAGGGAAGATCGGAGAAGGCACGTACGGACTCGTGTTCTTGGCGCGCATAAAGTCCCAAACCAATCGCGGCAAATCCATTGCCATCAAGAAATTCAAGCAGTCCAAAGATGGCGACGGTGTTTCTCCCACCGCTATTCGCGAAATCATGCTGCTGAGGGAGATAACCCACGAGAATGTTGTGAAGCTTGTAAATGTACACATCAATCACGCGGACATGTCTCTGTATCTTGCTTTTGATTACGCCGAGCACGACCTCTATGAAATAATTAGACATCATAGGGACAAAGTCAACCATTCCATTAATCAGTACACTGTTAAATCATTACTCTGGCAGTTGCTCAATGGACTAAACTATCTGCACAGTAATTGGATAATACATCGAGATTTAAAGCCCTCAAATATACTGGTTATGGGTGAAGGGGAGGAGCATGGAGTTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAAGCCCCTTTGAAGCCATTATCTGAAAATGGGGTTGTTGTAACCATTTGGTACCGTGCTCCTGAGTTGCTTCTTGGAGCAAAACATTATACTAGTGCTGTTGATATGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCTTGAAGCCACTATTTCAAGGTGTAGAAGTCAAAGCTACCCCAAATCCCTTTCAGCTCGATCAACTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCAAATCTCCCCCATTGGCAACAAGATGTTCAACATATACAAGGGCATAAATATGATAACAACAGTCTCTATAATGTTGTTCACCTATCTCCAAAAAGTCCTGCATTTGACCTTTTGTCAAAGATGCTTGAATATGATCCTCGAAAGCGTATTACAGCAGCACAAGCTTTGGAACATGAGTATTTCAAAATTGAACCACAGCCTGGGCGGAATGCCCTTGTACCCTGCCAACCGGGAGAGACATTTGTGAATTATCCCACTCGTCCAGTGGACACAACAACCGATTTTGAAGGGACAACCAATATGCAACCTCCACAGCCGGTTACATCGGGAGCTGCAGTTTCTGGCAGTATGCCTGGTGGTCATGTGTCAAATAGATCTGTTCCTCGACCAATGAATGTTGTTGGGATGCAAAGAATGCCTCATCAGGCAATGCAAGCTTATAATCTTACATCTCAGGCAGGGATGGGTGGTGGAATGAACCCTGGTGGCATGCCGATGCAACGAGGTGTACCACAGCCGCATCAGCAACAGCAGTTGAGGAGAAGAGACCAAATGGGGATGCCAGGATACCCTCAACAAAAGTCAAGACGTATATAA 1431 0.4577 MGDGGSGNRGGNSNNSGGGSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSQTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLANLPHWQQDVQHIQGHKYDNNSLYNVVHLSPKSPAFDLLSKMLEYDPRKRITAAQALEHEYFKIEPQPGRNALVPCQPGETFVNYPTRPVDTTTDFEGTTNMQPPQPVTSGAAVSGSMPGGHVSNRSVPRPMNVVGMQRMPHQAMQAYNLTSQAGMGGGMNPGGMPMQRGVPQPHQQQQLRRRDQMGMPGYPQQKSRRI* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2805 476 MobiDBLite consensus disorder prediction 1 22 - -
Ahy18g2805 476 ProSiteProfiles Protein kinase domain profile. 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2805 476 SUPERFAMILY Protein kinase-like (PK-like) 24 340 IPR011009 -
Ahy18g2805 476 Gene3D Phosphorylase Kinase; domain 1 19 111 - -
Ahy18g2805 476 MobiDBLite consensus disorder prediction 375 390 - -
Ahy18g2805 476 ProSitePatterns Protein kinases ATP-binding region signature. 35 62 IPR017441 GO:0005524
Ahy18g2805 476 MobiDBLite consensus disorder prediction 375 405 - -
Ahy18g2805 476 MobiDBLite consensus disorder prediction 7 22 - -
Ahy18g2805 476 CDD STKc_CDK8_like 28 339 - -
Ahy18g2805 476 Pfam Protein kinase domain 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2805 476 MobiDBLite consensus disorder prediction 432 476 - -
Ahy18g2805 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Ahy18g2805 476 Gene3D Transferase(Phosphotransferase) domain 1 112 353 - -
Ahy18g2805 476 PANTHER CYCLIN-DEPENDENT KINASE E-1 16 474 - -
Ahy18g2805 476 PANTHER CELL DIVISION PROTEIN KINASE 16 474 - -
Ahy18g2805 476 SMART serkin_6 29 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2805 Ahy-Chr18 132304958 132310919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2805 22 476 Core Cell Cycle Gene Families AT5G63610 77.609 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Ahy18g2805 Pkinase 1.70E-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2805 K02208 - gmx:100813433 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2805 18 132304958 132310919 Ahy18g2805 18 132304958 132310919 ECH