Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2716 ATGACCTTAGTGTCACAAGGTGGAAAATTTGAACTTGGTTTCTTCAGCCCTGGAACTTTAACAGTGAAGAGCACGGGCAATCTTTCACTCACAGAAAATGGTACTGAAACTACTTTTTGGAGCACAATCTCTCGAAAACAAGCAAAGAATCCGGTATTGGAGCTCTTGGACAGTGGCAATCTTGTGTTAAGAAATGAAGGGGAATCAAATCCAAAGGCCTATTTGTGGCAAAGCTTTGATTATCCTTCAGATACATACTTGCCATCGATGAAGTTAGGAAGGGACCTCCAAAACGGTTTTGATTGGTGCGTAACTTCTTGGAAGAGTCGAAATGATCCATCCCCTGTAGGCTTTTCTCTTGGTTTAGTTCTCAATGATTATCCTGAGTTTTCCATTATGAATGGCACAAAAAAATTATATCGGGCTGGACCTTGGAATGGCCTTTACTTAAGTGGCTACCCGGATCAATCCTATACATATATCTTTGAAACCACTTATGTCAAAAACAAGGATGAGATATCCTACAGCTCTAACACCAAGATTGATTCTATCCTTGCAAGAGCTGTAATAAACCAAACAAGTCAATCTATTACACAGTATATATGGGATGACAATCTTCAGAATTGGAAAAGTTTTGGATCAAAGCCAGTTGATGTGTGTGATAAATATGACCTTTGTGGAGCCTTTAGTTATTGCAGTGTAACAGAACCACAGCATGTCTGCCAATGCTTCAAAGGGTTCAGTCCAAAGTCACCAGAAGCATGGAACTCAAACAACTCCTCACAAGGATGCATTCGCGACAAACCATTAAGCTGCAATAATGTCACAAGCACTGATGGTTTTGTCAAATACACAGGCTTGAAAGTGCCGGATACTCAGCATACTAAGCTGCTTGAGAATATTAATTTAGATGAATGCAGAAATCTATGTTTGAAGAACTGCTCTTGTATGGCTTATGCCAATTCAGACATAAGAGGAGGAGGCAGTGGCTGCGTCATGTGGTTTGGTGATCTAATTGACATCAAAATATTTCAATCTGGTGGACAGGATCTGTACATCCGAATGCCTGCTTTGGAATCAGGACTTCAACATCGGAACATGAAAAAAGTGATAATTGCTAGCACCATTGCTGCAATTTGTGCAACACTTCTACTTTGTGTTTATGTTATATACAGAGTCCGAAGGAACAATATTGAATGGTCAAAAGCAGAATTGTTTGAAGGATATGTAAATGACACGGATCTACCCATGTTTGATCTACTAATGGTTACTACTGCCACTGACAACTTCTCCTTGAATAACAAGATTGGACAAGGTGGTTTTGGAACTGTATATAAGGGGAAATTAGCAGATGGGCAAGAAATTGCTGTCAAGAGACTTTCACAGAGTTCTGGCCAAGGAATGACGGAATTTCTAACTGAAGTGAAGCTTATTGCAAAGCTTCAGCATCGAAATTTAGTAAAACTTCTTGGTTGCTGCATTCGAGGACAAGAAAAGTTGTTAGTTTATGAATACATGGTTAATGGCAGCCTAGACAACTTCATTTTTGATCGAATGAAAAGCAAGTTGCTGGAGTGGCCTCAACGCTTCCTCATAATATTTGGAGTTGCTAGGGGACTTCTATATTTACACCATGATTCAAGATTGAGAATTATCCACAGAGATCTCAAATTAAGTAACGTTTTACTTGATGATAAGTTAAATCCTAAAATATCAGACTTTGGAATTGCTAGAGCTTTTGGAGTTGATCAGACTCATGGAAACACAAATAGAGTTATTGGGACTTATGGATACATGGCACCAGAGTATGCTATCAATGGGCTGTTTTCAGTAAAATCCGACGTCTTCAGCTTTGGTGTAATATTGATGGAGATTATAAGTGGGAACAGAAACAGAGCGCTTTGTCATGCAAATGAGACTCTTAATCTTGTTGGCTATGCTTGGATGCTTTGGAAAGAGGACAGGCCTTTGGAGCTGATCGATCCAAACATAAAGGAGTCATGTGTCATCCCAGAAGTATTGCGGTGCATCCATGTTAGTCTCTTATGTGTGCAACAACACCCTGAAGATCGGCCTACAATGGCCTCAGTACTTGTCATGTTAGGAAGTAAGATGGACTTAGTTGATCCTAAAGAGCCTGGCTTCTTTTCCTGCAAGCTCCCCACTGAAGTGAGTTCACACTCAGATCAACATAACATCATGTCTTTAAATGATGAATTAACTATTACCTCATTAGATGGTCGGTGA 2247 0.3974 MTLVSQGGKFELGFFSPGTLTVKSTGNLSLTENGTETTFWSTISRKQAKNPVLELLDSGNLVLRNEGESNPKAYLWQSFDYPSDTYLPSMKLGRDLQNGFDWCVTSWKSRNDPSPVGFSLGLVLNDYPEFSIMNGTKKLYRAGPWNGLYLSGYPDQSYTYIFETTYVKNKDEISYSSNTKIDSILARAVINQTSQSITQYIWDDNLQNWKSFGSKPVDVCDKYDLCGAFSYCSVTEPQHVCQCFKGFSPKSPEAWNSNNSSQGCIRDKPLSCNNVTSTDGFVKYTGLKVPDTQHTKLLENINLDECRNLCLKNCSCMAYANSDIRGGGSGCVMWFGDLIDIKIFQSGGQDLYIRMPALESGLQHRNMKKVIIASTIAAICATLLLCVYVIYRVRRNNIEWSKAELFEGYVNDTDLPMFDLLMVTTATDNFSLNNKIGQGGFGTVYKGKLADGQEIAVKRLSQSSGQGMTEFLTEVKLIAKLQHRNLVKLLGCCIRGQEKLLVYEYMVNGSLDNFIFDRMKSKLLEWPQRFLIIFGVARGLLYLHHDSRLRIIHRDLKLSNVLLDDKLNPKISDFGIARAFGVDQTHGNTNRVIGTYGYMAPEYAINGLFSVKSDVFSFGVILMEIISGNRNRALCHANETLNLVGYAWMLWKEDRPLELIDPNIKESCVIPEVLRCIHVSLLCVQQHPEDRPTMASVLVMLGSKMDLVDPKEPGFFSCKLPTEVSSHSDQHNIMSLNDELTITSLDGR* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2716 748 Gene3D Hepatocyte Growth Factor 273 352 - -
Ahy18g2716 748 PIRSF SRK 1 20 IPR024171 GO:0004674
Ahy18g2716 748 PIRSF SRK 18 748 IPR024171 GO:0004674
Ahy18g2716 748 ProSiteProfiles PAN/Apple domain profile. 272 356 IPR003609 -
Ahy18g2716 748 Gene3D - 1 79 IPR036426 -
Ahy18g2716 748 Pfam PAN-like domain 275 341 IPR003609 -
Ahy18g2716 748 SUPERFAMILY alpha-D-mannose-specific plant lectins 16 113 IPR036426 -
Ahy18g2716 748 SMART serkin_6 430 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2716 748 SUPERFAMILY Protein kinase-like (PK-like) 412 701 IPR011009 -
Ahy18g2716 748 ProSitePatterns Protein kinases ATP-binding region signature. 436 458 IPR017441 GO:0005524
Ahy18g2716 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
Ahy18g2716 748 Pfam Protein tyrosine and serine/threonine kinase 431 698 IPR001245 GO:0004672|GO:0006468
Ahy18g2716 748 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 747 - -
Ahy18g2716 748 ProSiteProfiles EGF-like domain profile. 216 253 IPR000742 -
Ahy18g2716 748 ProSiteProfiles Protein kinase domain profile. 430 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy18g2716 748 ProSiteProfiles Bulb-type lectin domain profile. 1 76 IPR001480 -
Ahy18g2716 748 Gene3D Transferase(Phosphotransferase) domain 1 506 710 - -
Ahy18g2716 748 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 747 - -
Ahy18g2716 748 CDD STKc_IRAK 436 701 - -
Ahy18g2716 748 Pfam D-mannose binding lectin 18 108 IPR001480 -
Ahy18g2716 748 Pfam S-locus glycoprotein domain 140 251 IPR000858 GO:0048544
Ahy18g2716 748 SMART ntp_6 276 355 IPR003609 -
Ahy18g2716 748 Gene3D Phosphorylase Kinase; domain 1 393 505 - -
Ahy18g2716 748 CDD PAN_AP_plant 269 356 - -
Ahy18g2716 748 SMART blect_4 2 82 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2716 Ahy-Chr18 130499823 130503269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2716 370 731 Receptor kinase-like Gene Family AT4G23190 51.344 1.42e-125 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy18g2716 PK_Tyr_Ser-Thr 8.20E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2716 - - aip:110265385 1140.95